RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 EHD4Q9H223 541 aa17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 ALG13Q9NP73 1137 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 PIH1D3Q9NQM4 214 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 SIAH1Q8IUQ4 282 aa17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 NEK9Q8TD19 979 aa17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 ALDH8A1Q9H2A2 487 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 ZNF214Q9UL59 606 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 COL4A6Q14031 1691 aa17.19■□□□□ 0.34
CSNK1D-213ENST00000580446 TECTAO75443 2155 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 VWA5AO00534 786 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 RAD21O60216 631 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 CYP7A1P22680 504 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 VCPP55072 806 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 DEFB103AP81534 67 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 FSCN1Q16658 493 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 FAM117BQ6P1L5 589 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 MAMDC4Q6UXC1 1216 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 ARMCX2Q7L311 632 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 PHOSPHO2Q8TCD6 241 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 ZBED2Q9BTP6 218 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 AKAP2Q9Y2D5 859 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 SCN5AQ14524 2016 aa17.18■□□□□ 0.34
CSNK1D-213ENST00000580446 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 CACNA1HO95180 2353 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 TMEM221A6NGB7 291 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 H0Y858 1186 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 M0R296 226 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 CYP2E1P05181 493 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 PFKMP08237 780 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 TLK2Q86UE8 772 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 TLR9Q9NR96 1032 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 FOCADQ5VW36 1801 aa17.17■□□□□ 0.34
CSNK1D-213ENST00000580446 DNAJC25-GNG10A0A024R161 153 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 MED19A0JLT2 244 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 DYNC1LI2O43237 492 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 CYP2D6P10635 497 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 TNFAIP2Q03169 654 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 SNRNP48Q6IEG0 339 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 TTC6Q86TZ1 520 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 C17orf80Q9BSJ5 609 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 KATNBL1Q9H079 304 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 ABHD16BQ9H3Z7 469 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 TNKSO95271 1327 aa17.16■□□□□ 0.34
CSNK1D-213ENST00000580446 LINC01553A4QN01 128 aa17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 KCNJ6P48051 423 aa17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 PUS10Q3MIT2 529 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 ERMP1Q7Z2K6 904 aa17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 SUGP1Q8IWZ8 645 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 DCHS1Q96JQ0 3298 aa17.15■□□□□ 0.34
CSNK1D-213ENST00000580446 NCOR2Q9Y618 2525 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 POLR3DP05423 398 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 AKR1B1P15121 316 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 ZAP70P43403 619 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 ID4P47928 161 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 ERVK-21P61565 698 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 WDR5P61964 334 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 ICA1Q05084 483 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 TCEAL5Q5H9L2 206 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 FAM83BQ5T0W9 1011 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 EDAQ92838 391 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 TGS1Q96RS0 853 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 PPP1R9AQ9ULJ8 1098 aa17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 COL11A1P12107 1806 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-213ENST00000580446 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 CABYRO75952 493 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 IQCF3P0C7M6 154 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 SMPD1P17405 629 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 CNTN2Q02246 1040 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 FAM47CQ5HY64 1035 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 TRIM67Q6ZTA4 783 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 CPXCR1Q8N123 301 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 PDGFCQ9NRA1 345 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 CLDND1Q9NY35 253 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
CSNK1D-213ENST00000580446 RIF1Q5UIP0 2472 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 UQCRFS1P1P0C7P4 283 aa17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 GABPAQ06546 454 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms