RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SNAP25P60880 206 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 ZNF543Q08ER8 600 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 GPATCH4Q5T3I0 446 aaKnown RBP12.77□□□□□ -0.37
NDEL1-208ENST00000580237 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 ENAHQ8N8S7 591 aaPredicted RBP12.77□□□□□ -0.37
NDEL1-208ENST00000580237 CHST13Q8NET6 341 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 NCOA7Q8NI08 942 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
NDEL1-208ENST00000580237 LCTP09848 1927 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 CYBAP13498 195 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 TKFCQ3LXA3 575 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 CRISPLD2Q9H0B8 497 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
NDEL1-208ENST00000580237 E7EWF7 191 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 IFIT3O14879 490 aaKnown RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 PFASO15067 1338 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 ICAM1P05362 532 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 PARP1P09874 1014 aaKnown RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 PRPF38BQ5VTL8 546 aaKnown RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 NECAB2Q7Z6G3 386 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 DPF3Q92784 378 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 RANBP17Q9H2T7 1088 aaKnown RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 DDX20Q9UHI6 824 aaKnown RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 PNMA2Q9UL42 364 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 DIS3Q9Y2L1 958 aaKnown RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 BRCA2P51587 3418 aa12.75□□□□□ -0.37
NDEL1-208ENST00000580237 TNRC18O15417 2968 aaPredicted RBP12.75□□□□□ -0.37
NDEL1-208ENST00000580237 CEP290O15078 2479 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 BAZ2BQ9UIF8 2168 aaKnown RBP12.74□□□□□ -0.37
NDEL1-208ENST00000580237 ZNF536O15090 1300 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 WTAPQ15007 396 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 NSMFQ6X4W1 530 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
NDEL1-208ENST00000580237 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
NDEL1-208ENST00000580237 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
NDEL1-208ENST00000580237 OGDHLQ9ULD0 1010 aa12.74□□□□□ -0.37
NDEL1-208ENST00000580237 TAL1P17542 331 aaPredicted RBP12.73□□□□□ -0.37
NDEL1-208ENST00000580237 TMEM67Q5HYA8 995 aa12.73□□□□□ -0.37
NDEL1-208ENST00000580237 ANO1Q5XXA6 986 aa12.73□□□□□ -0.37
NDEL1-208ENST00000580237 STOX1Q6ZVD7 989 aa12.73□□□□□ -0.37
NDEL1-208ENST00000580237 C11orf49Q9H6J7 331 aa12.73□□□□□ -0.37
NDEL1-208ENST00000580237 A1CFQ9NQ94 594 aaKnown RBP12.73□□□□□ -0.37
NDEL1-208ENST00000580237 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
NDEL1-208ENST00000580237 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
NDEL1-208ENST00000580237 TAF6LQ9Y6J9 622 aa12.73□□□□□ -0.37
NDEL1-208ENST00000580237 WDR19Q8NEZ3 1342 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 PTPDC1A2A3K4 754 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 SLC27A2O14975 620 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 SEPT4O43236 478 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
NDEL1-208ENST00000580237 USH1GQ495M9 461 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 PRAMEF19Q5SWL8 479 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
NDEL1-208ENST00000580237 CHST3Q7LGC8 479 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 MSL3Q8N5Y2 521 aaKnown RBP12.72□□□□□ -0.37
NDEL1-208ENST00000580237 TRPV1Q8NER1 839 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
NDEL1-208ENST00000580237 DNAJC25-GNG10A0A024R161 153 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 EVI5O60447 810 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 RARBP10826 455 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 AKR1A1P14550 325 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 MCM5P33992 734 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 SEC23AQ15436 765 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 ARMCX2Q7L311 632 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 UBE2Q1Q7Z7E8 422 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
NDEL1-208ENST00000580237 MB21D2Q8IYB1 491 aaPredicted RBP12.71□□□□□ -0.37
NDEL1-208ENST00000580237 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
NDEL1-208ENST00000580237 NFIBO00712 420 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 PRC1O43663 620 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 CNTN2Q02246 1040 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 LHX8Q68G74 356 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 ADGRF4Q8IZF3 695 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms