RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 SMC4Q9NTJ3 1288 aa6.85□□□□□ -1.31
DDX42-210ENST00000579539 KNSTRNQ9Y448 316 aa6.85□□□□□ -1.31
DDX42-210ENST00000579539 SAMD9Q5K651 1589 aa6.85□□□□□ -1.31
DDX42-210ENST00000579539 ARHGEF11O15085 1522 aa6.85□□□□□ -1.31
DDX42-210ENST00000579539 EHBP1L1Q8N3D4 1523 aa6.85□□□□□ -1.31
DDX42-210ENST00000579539 VIRMAQ69YN4 1812 aaKnown RBP6.85□□□□□ -1.31
DDX42-210ENST00000579539 LTBP3Q9NS15 1303 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 KDM5CP41229 1560 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 VGLL3A8MV65 326 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 IPO8O15397 1037 aaKnown RBP6.84□□□□□ -1.31
DDX42-210ENST00000579539 PDE8AO60658 829 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 WISP1O95388 367 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 ACRP10323 421 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 ARNTP27540 789 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 CYP2C19P33261 490 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 PABPC4Q13310 644 aaKnown RBP eCLIP6.84□□□□□ -1.31
DDX42-210ENST00000579539 FOXB2Q5VYV0 432 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
DDX42-210ENST00000579539 VN1R5Q7Z5H4 357 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 TAB3Q8N5C8 712 aaPredicted RBP6.84□□□□□ -1.31
DDX42-210ENST00000579539 KIF18AQ8NI77 898 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 BSNDQ8WZ55 320 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 CAAP1Q9H8G2 361 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.31
DDX42-210ENST00000579539 DDX19BQ9UMR2 479 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 SOX13Q9UN79 622 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 ATAD2BQ9ULI0 1458 aa6.84□□□□□ -1.31
DDX42-210ENST00000579539 PIK3C2GO75747 1445 aa6.84□□□□□ -1.32
DDX42-210ENST00000579539 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 PRR36Q9H6K5 1346 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 DDX3YO15523 660 aaKnown RBP6.83□□□□□ -1.32
DDX42-210ENST00000579539 SUSD5O60279 629 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 HTR3BO95264 441 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 CAVIN2O95810 425 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 RARSP54136 660 aaKnown RBP6.83□□□□□ -1.32
DDX42-210ENST00000579539 LONRF2Q1L5Z9 754 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 ICE2Q659A1 982 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 OVOS1Q6IE37 1185 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 VHLLQ6RSH7 139 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 CCDC91Q7Z6B0 441 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 UBR7Q8N806 425 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 ZBTB38Q8NAP3 1195 aaPredicted RBP6.83□□□□□ -1.32
DDX42-210ENST00000579539 KLHL23Q8NBE8 558 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 GCC1Q96CN9 775 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 DEF6Q9H4E7 631 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 TCEAL9Q9UHQ7 104 aa6.83□□□□□ -1.32
DDX42-210ENST00000579539 SCAF11Q99590 1463 aaKnown RBP6.83□□□□□ -1.32
DDX42-210ENST00000579539 UGGT2Q9NYU1 1516 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 SUPT6HQ7KZ85 1726 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 GSG1L2A8MUP6 293 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 DNAJA2O60884 412 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 ADAM11O75078 769 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 BCAR3O75815 825 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 ALDH1L1O75891 902 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 U2AF2P26368 475 aaKnown RBP eCLIP6.82□□□□□ -1.32
DDX42-210ENST00000579539 PMLP29590 882 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 PPP2R1AP30153 589 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 CASQ1P31415 396 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 NOP2P46087 812 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 RHBDL3P58872 404 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 NUCB1Q02818 461 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 MVPQ14764 893 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 ZKSCAN2Q63HK3 967 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 FAM117BQ6P1L5 589 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 PRR23CQ6ZRP0 262 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 CCAR1Q8IX12 1150 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 CCDC112Q8NEF3 446 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 KLHL6Q8WZ60 621 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 INTS4Q96HW7 963 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 EXOC2Q96KP1 924 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 NOL10Q9BSC4 688 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 FAM107BQ9H098 131 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 NCOA5Q9HCD5 579 aaKnown RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 CACNA2D2Q9NY47 1150 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 PSD3Q9NYI0 1048 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 PCDHB10Q9UN67 800 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.82□□□□□ -1.32
DDX42-210ENST00000579539 CORINQ9Y5Q5 1042 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 KIF14Q15058 1648 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 ANKRD36BQ8N2N9 1353 aa6.82□□□□□ -1.32
DDX42-210ENST00000579539 A0A1B0GUL7 405 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 ALG1L2C9J202 215 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 H3BRJ5 948 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 RFPL3O75679 317 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 IVLP07476 585 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 SOX5P35711 763 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 TUBB4BP68371 445 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 NFKB2Q00653 900 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 NCAPHQ15003 741 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 TTF1Q15361 905 aaPredicted RBP6.81□□□□□ -1.32
DDX42-210ENST00000579539 NFE2Q16621 373 aaPredicted RBP6.81□□□□□ -1.32
DDX42-210ENST00000579539 LRRFIP1Q32MZ4 808 aaKnown RBP6.81□□□□□ -1.32
DDX42-210ENST00000579539 HSP90AB3PQ58FF7 597 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 CASC1Q6TDU7 716 aa6.81□□□□□ -1.32
DDX42-210ENST00000579539 UNC5AQ6ZN44 842 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms