RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PHF24Q9UPV7 400 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 FGAP02671 866 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 FDX1P10109 184 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 HSPD1P10809 573 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CNTN2Q02246 1040 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TLE2Q04725 743 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SNX17Q15036 470 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 RCSD1Q6JBY9 416 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MAMDC4Q6UXC1 1216 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CCDC144CPQ8IYA2 1237 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 BADQ92934 168 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 STARD7Q9NQZ5 370 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PDLIM7Q9NR12 457 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DNAH12Q6ZR08 3092 aa10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZNF536O15090 1300 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 FRMPD2Q68DX3 1309 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CCDC171Q6TFL3 1326 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MYADML2A6NDP7 307 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ORC4O43929 436 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ADAMTS4O75173 837 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CLTBP09497 229 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SLC16A2P36021 539 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ALX1Q15699 326 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CCDC144BQ3MJ40 725 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 NOL8Q76FK4 1167 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZNF467Q7Z7K2 595 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CHD1LQ86WJ1 897 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 EXOC6Q8TAG9 804 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 NUP133Q8WUM0 1156 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CCPG1Q9ULG6 757 aa10.87□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ADCY6O43306 1168 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DUSP11O75319 330 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 IGHDP01880 384 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 RAG1P15918 1043 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ACLYP53396 1101 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 AAMPQ13685 434 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 KCNA10Q16322 511 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TKFCQ3LXA3 575 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MUM1L1Q5H9M0 696 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 C1orf53Q5VUE5 145 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TTBK2Q6IQ55 1244 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CWC27Q6UX04 472 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 NSMFQ6X4W1 530 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MFSD6Q6ZSS7 791 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SMC5Q8IY18 1101 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TRIM43Q96BQ3 446 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 FGD4Q96M96 766 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 GLT1D1Q96MS3 346 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 FAM161BQ96MY7 647 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TMEM39AQ9NV64 488 aa10.86□□□□□ -0.67
CDK5RAP3-211ENST00000578996 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SOWAHBA6NEL2 793 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PLA2G6O60733 806 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ASGR1P07306 291 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TOP1P11387 765 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SDSP20132 328 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 NUCB1Q02818 461 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SHHQ15465 462 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 C9orf50Q5SZB4 431 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 AKNAD1Q5T1N1 836 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SYDE2Q5VT97 1194 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 EEPD1Q7L9B9 569 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PLEKHM2Q8IWE5 1019 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 FAM133AQ8N9E0 248 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SLC17A8Q8NDX2 589 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TMEM47Q9BQJ4 181 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZKSCAN3Q9BRR0 538 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TSEN34Q9BSV6 310 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DIAPH3Q9NSV4 1193 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DDX49Q9Y6V7 483 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 LTBP2Q14767 1821 aa10.85□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZMYM6O95789 1325 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PTPDC1A2A3K4 754 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ASB14A6NK59 587 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DCDC2CA8MYV0 355 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZNF213O14771 459 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ICAM1P05362 532 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms