RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
GGA3-206ENST00000578773 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 PTPN5P54829 565 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 ACVR2BQ13705 512 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 KCTD2Q14681 263 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
GGA3-206ENST00000578773 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 REPS2Q8NFH8 660 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 KATNBL1Q9H079 304 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 EPG5Q9HCE0 2579 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 DNAH14Q0VDD8 3507 aa13.59□□□□□ -0.23
GGA3-206ENST00000578773 BAG3O95817 575 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 ASCL5Q7RTU5 278 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 TRMT13Q9NUP7 481 aaKnown RBP13.58□□□□□ -0.24
GGA3-206ENST00000578773 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.24
GGA3-206ENST00000578773 ZNF214Q9UL59 606 aaPredicted RBP13.58□□□□□ -0.24
GGA3-206ENST00000578773 RIPK3Q9Y572 518 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 SCN10AQ9Y5Y9 1956 aa13.58□□□□□ -0.24
GGA3-206ENST00000578773 DNAJC25-GNG10A0A024R161 153 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 SLC25A27O95847 323 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 PLCG2P16885 1265 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 EHD4Q9H223 541 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
GGA3-206ENST00000578773 CABP5Q9NP86 173 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 COPRSQ9NQ92 184 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 PIH1D3Q9NQM4 214 aaKnown RBP13.57□□□□□ -0.24
GGA3-206ENST00000578773 ADAMTS5Q9UNA0 930 aa13.57□□□□□ -0.24
GGA3-206ENST00000578773 MICAL3Q7RTP6 2002 aa13.56□□□□□ -0.24
GGA3-206ENST00000578773 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
GGA3-206ENST00000578773 CYP2E1P05181 493 aaPredicted RBP13.56□□□□□ -0.24
GGA3-206ENST00000578773 VCPP55072 806 aaKnown RBP13.56□□□□□ -0.24
GGA3-206ENST00000578773 DEFB103AP81534 67 aa13.56□□□□□ -0.24
GGA3-206ENST00000578773 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
GGA3-206ENST00000578773 BAHCC1Q9P281 2608 aa13.56□□□□□ -0.24
GGA3-206ENST00000578773 MYH4Q9Y623 1939 aa13.55□□□□□ -0.24
GGA3-206ENST00000578773 STAT3P40763 770 aa13.55□□□□□ -0.24
GGA3-206ENST00000578773 ATF7IPQ6VMQ6 1270 aa13.55□□□□□ -0.24
GGA3-206ENST00000578773 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
GGA3-206ENST00000578773 LMCD1Q9NZU5 365 aa13.55□□□□□ -0.24
GGA3-206ENST00000578773 CFAP47Q6ZTR5 3102 aa13.55□□□□□ -0.24
GGA3-206ENST00000578773 MED19A0JLT2 244 aaPredicted RBP13.54□□□□□ -0.24
GGA3-206ENST00000578773 VWA5AO00534 786 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 CYP2D6P10635 497 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 USP5P45974 858 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 NKX3-2P78367 333 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 GABPAQ06546 454 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 ARMCX2Q7L311 632 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 SPC25Q9HBM1 224 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 GVINP1Q7Z2Y8 2422 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
GGA3-206ENST00000578773 ZNF292O60281 2723 aa13.54□□□□□ -0.24
GGA3-206ENST00000578773 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 TMEM221A6NGB7 291 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 M0R296 226 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
GGA3-206ENST00000578773 CYP7A1P22680 504 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 CLUL1Q15846 466 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
GGA3-206ENST00000578773 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 TLK2Q86UE8 772 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 RNF135Q8IUD6 432 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 ADHFE1Q8IWW8 467 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 PHOSPHO2Q8TCD6 241 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
GGA3-206ENST00000578773 GNEQ9Y223 722 aaKnown RBP13.53□□□□□ -0.24
GGA3-206ENST00000578773 FRYLO94915 3013 aa13.52□□□□□ -0.24
GGA3-206ENST00000578773 PFKMP08237 780 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 AKR1B1P15121 316 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 ZAP70P43403 619 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 ERVK-21P61565 698 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 WDR5P61964 334 aaKnown RBP13.52□□□□□ -0.25
GGA3-206ENST00000578773 GPNMBQ14956 572 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 FSCN1Q16658 493 aaKnown RBP13.52□□□□□ -0.25
GGA3-206ENST00000578773 EP400NLQ6ZTU2 488 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 MSL3Q8N5Y2 521 aaKnown RBP13.52□□□□□ -0.25
GGA3-206ENST00000578773 PBXIP1Q96AQ6 731 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 FTOQ9C0B1 505 aaKnown RBP eCLIP13.52□□□□□ -0.25
GGA3-206ENST00000578773 TNKSO95271 1327 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 RALGAPA2Q2PPJ7 1873 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.25
GGA3-206ENST00000578773 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
GGA3-206ENST00000578773 ACTN1P12814 892 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 SMPD1P17405 629 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 CNTN2Q02246 1040 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 TNFAIP2Q03169 654 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 SNRNP48Q6IEG0 339 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms