RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 HSP90AA1P07900 732 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 IFNAR1P17181 557 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CDC27P30260 824 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ADD1P35611 737 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SLC16A2P36021 539 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CCNA1P78396 465 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PKN2Q16513 984 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 WASF1Q92558 559 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 LLPHQ9BRT6 129 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RIOX1Q9H6W3 641 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SLC38A10Q9HBR0 1119 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RNF186Q9NXI6 227 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RABGAP1Q9Y3P9 1069 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PLXNA1Q9UIW2 1896 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 STK36Q9NRP7 1315 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ZBTB5O15062 677 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TLR2O60603 784 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TRPA1O75762 1119 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CYP2C8P10632 490 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CCDC82Q8N4S0 544 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SRBD1Q8N5C6 995 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CCDC12Q8WUD4 166 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PAGR1Q9BTK6 254 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 AMNQ9BXJ7 453 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 JMJD4Q9H9V9 463 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CWC22Q9HCG8 908 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ADAMTS5Q9UNA0 930 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CNTNAP5Q8WYK1 1306 aa13.04□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ATP2A1O14983 1001 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PRPF3O43395 683 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 DEXIO95424 95 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 LARGE1O95461 756 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SLC25A27O95847 323 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ICAM1P05362 532 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 XBP1P17861 261 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CRHR2Q13324 411 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PLS1Q14651 629 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TKFCQ3LXA3 575 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CCDC174Q6PII3 467 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PIGSQ96S52 555 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CFHR5Q9BXR6 569 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FAM217BQ9NTX9 383 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-210ENST00000578733 STAT3P40763 770 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ERVK-24P63145 666 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NTRK3Q16288 839 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 QRICH1Q2TAL8 776 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SNRNP48Q6IEG0 339 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CMTR1Q8N1G2 835 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CCDC148Q8NFR7 591 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PHKBQ93100 1093 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SPATC1LQ9H0A9 340 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MORF4L1Q9UBU8 362 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 FBXO40Q9UH90 709 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CCPG1Q9ULG6 757 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ABCB11O95342 1321 aa13.02□□□□□ -0.33
CDK5RAP3-210ENST00000578733 DOCK3Q8IZD9 2030 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CYTH3O43739 400 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SCG2P13521 617 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 TRIM29Q14134 588 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 KIF22Q14807 665 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 TMEM132BQ14DG7 1078 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NBPF11Q86T75 865 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ANKRD13CQ8N6S4 541 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PIBF1Q8WXW3 757 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MTMR8Q96EF0 704 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MROH8Q9H579 483 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms