RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.41■□□□□ 0.7
SREBF1-218ENST00000578469 SYNPO2Q9UMS6 1093 aa19.41■□□□□ 0.7
SREBF1-218ENST00000578469 FRMPD2Q68DX3 1309 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-218ENST00000578469 TRIM75PA6NK02 468 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 STXBP3O00186 592 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 GH2P01242 217 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 PTPAQ15257 358 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 SLC35G1Q2M3R5 365 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 SLFN13Q68D06 897 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 WWC2Q6AWC2 1192 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 DAGLBQ8NCG7 672 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
SREBF1-218ENST00000578469 TNMDQ9H2S6 317 aa19.4■□□□□ 0.7
SREBF1-218ENST00000578469 CTAGE5O15320 804 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 KINO60870 393 aaKnown RBP19.39■□□□□ 0.69
SREBF1-218ENST00000578469 CUTAO60888 179 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 TRAPPC10P48553 1259 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 TOB1P50616 345 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-218ENST00000578469 NAPAP54920 295 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 SREBF2Q12772 1141 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 MAP3K11Q16584 847 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 ZNF296Q8WUU4 475 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-218ENST00000578469 TNFRSF25Q93038 417 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 TMEM39BQ9GZU3 492 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 UBA5Q9GZZ9 404 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 ARHGEF10LQ9HCE6 1279 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 C6orf50Q9HD87 102 aa19.39■□□□□ 0.69
SREBF1-218ENST00000578469 NR1I2O75469 434 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 CMA1P23946 247 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 GNA11P29992 359 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 RASA3Q14644 834 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 NPY5RQ15761 445 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 KRI1Q8N9T8 703 aaKnown RBP19.38■□□□□ 0.69
SREBF1-218ENST00000578469 GMCL1P1Q8NEA9 526 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 PIGSQ96S52 555 aa19.38■□□□□ 0.69
SREBF1-218ENST00000578469 MORC2Q9Y6X9 1032 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-218ENST00000578469 RAD21O60216 631 aa19.37■□□□□ 0.69
SREBF1-218ENST00000578469 TBC1D8O95759 1140 aa19.37■□□□□ 0.69
SREBF1-218ENST00000578469 ATP2B1P20020 1258 aa19.37■□□□□ 0.69
SREBF1-218ENST00000578469 MARCKSP29966 332 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-218ENST00000578469 SLC1A4P43007 532 aa19.37■□□□□ 0.69
SREBF1-218ENST00000578469 NOM1Q5C9Z4 860 aaKnown RBP19.37■□□□□ 0.69
SREBF1-218ENST00000578469 CPVLQ9H3G5 476 aa19.37■□□□□ 0.69
SREBF1-218ENST00000578469 MYH4Q9Y623 1939 aa19.37■□□□□ 0.69
SREBF1-218ENST00000578469 PNMA6FA0A0J9YX94 578 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 CCDC194A0A1B0GVG4 234 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 ESYT2A0FGR8 921 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 F5H6K3 240 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 MAP3K10Q02779 954 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 KLRC3Q07444 240 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 TTC38Q5R3I4 469 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 AXDND1Q5T1B0 1012 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-218ENST00000578469 PPP1R18Q6NYC8 613 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 PIK3AP1Q6ZUJ8 805 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 MOB2Q70IA6 237 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 ADGRF4Q8IZF3 695 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 GMCL1Q96IK5 515 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 ZMYND12Q9H0C1 365 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 GOLPH3LQ9H4A5 285 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 PCDHB6Q9Y5E3 794 aa19.36■□□□□ 0.69
SREBF1-218ENST00000578469 SMCO2A6NFE2 343 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 CCDC192P0DO97 292 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 XRCC6P12956 609 aaKnown RBP eCLIP19.35■□□□□ 0.69
SREBF1-218ENST00000578469 RRP1BQ14684 758 aaKnown RBP19.35■□□□□ 0.69
SREBF1-218ENST00000578469 FBXO46Q6PJ61 603 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-218ENST00000578469 KCTD1Q719H9 257 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 ENGASEQ8NFI3 743 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 HOOK2Q96ED9 719 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 SH2D4AQ9H788 454 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 JMJD4Q9H9V9 463 aa19.35■□□□□ 0.69
SREBF1-218ENST00000578469 BAZ2BQ9UIF8 2168 aaKnown RBP19.34■□□□□ 0.69
SREBF1-218ENST00000578469 A0A1B0GVL5 298 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 GPR25O00155 361 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 PTPREP23469 700 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 TM4SF4P48230 202 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 CAMK4Q16566 473 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 SHROOM1Q2M3G4 852 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-218ENST00000578469 PRAMEF18Q5VWM3 479 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 TTBK2Q6IQ55 1244 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 TYW1BQ6NUM6 668 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 MIGA2Q7L4E1 593 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 KRT25Q7Z3Z0 450 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 APOBEC3FQ8IUX4 373 aaKnown RBP19.34■□□□□ 0.69
SREBF1-218ENST00000578469 FMR1NBQ8N0W7 255 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-218ENST00000578469 ANP32BQ92688 251 aaKnown RBP19.34■□□□□ 0.69
SREBF1-218ENST00000578469 GOPCQ9HD26 462 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 GINM1Q9NU53 330 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 FAM13BQ9NYF5 915 aa19.34■□□□□ 0.69
SREBF1-218ENST00000578469 SCAF8Q9UPN6 1271 aaKnown RBP19.34■□□□□ 0.69
SREBF1-218ENST00000578469 FAM205CA6NFA0 338 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 ZBTB5O15062 677 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 FKTNO75072 461 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 NDUFB10O96000 172 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 ASNSP08243 561 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms