RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 CELA2BP08218 269 aaPredicted RBP6.28□□□□□ -1.4
KRT39-202ENST00000578029 RAB6AP20340 208 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 ECI1P42126 302 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 USP11P51784 963 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
KRT39-202ENST00000578029 SEPT7Q16181 437 aaKnown RBP6.28□□□□□ -1.4
KRT39-202ENST00000578029 SLC35F1Q5T1Q4 408 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 LHFPL2Q6ZUX7 228 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 TMEM130Q8N3G9 435 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 PI4K2BQ8TCG2 481 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 MORC4Q8TE76 937 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 IRF7Q92985 503 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 ZDHHC15Q96MV8 337 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 DSCC1Q9BVC3 393 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 YIPF2Q9BWQ6 316 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 PRDM14Q9GZV8 571 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 ACSS3Q9H6R3 686 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.28□□□□□ -1.4
KRT39-202ENST00000578029 RRAGCQ9HB90 399 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 GFOD1Q9NXC2 390 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 GPR55Q9Y2T6 319 aaPredicted RBP6.28□□□□□ -1.4
KRT39-202ENST00000578029 SPEF1Q9Y4P9 236 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 SART1O43290 800 aaKnown RBP6.27□□□□□ -1.41
KRT39-202ENST00000578029 CAND2O75155 1236 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 VAMP4O75379 141 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 SLITRK5O94991 958 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 CRTAMO95727 393 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 RAB27AP51159 221 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 TMPRSS15P98073 1019 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
KRT39-202ENST00000578029 PIK3R6Q5UE93 754 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 ZCCHC8Q6NZY4 707 aaKnown RBP6.27□□□□□ -1.41
KRT39-202ENST00000578029 DDX53Q86TM3 631 aaKnown RBP6.27□□□□□ -1.41
KRT39-202ENST00000578029 KIF18BQ86Y91 864 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
KRT39-202ENST00000578029 ORAI3Q9BRQ5 295 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 PRDM10Q9NQV6 1147 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 APOBEC2Q9Y235 224 aaKnown RBP6.27□□□□□ -1.41
KRT39-202ENST00000578029 DAGLAQ9Y4D2 1042 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 TRAF6Q9Y4K3 522 aa6.27□□□□□ -1.41
KRT39-202ENST00000578029 PIK3R2O00459 728 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 AKAP10O43572 662 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 GAS2O43903 313 aaKnown RBP6.26□□□□□ -1.41
KRT39-202ENST00000578029 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 PYGMP11217 842 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 ELNP15502 786 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 BPIP17213 487 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 HOXB4P17483 251 aaPredicted RBP6.26□□□□□ -1.41
KRT39-202ENST00000578029 GNALP38405 381 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 POU4F1Q01851 419 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 PRSS53Q2L4Q9 553 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 LYPD4Q6UWN0 246 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 RSPO2Q6UXX9 243 aaPredicted RBP6.26□□□□□ -1.41
KRT39-202ENST00000578029 MTDHQ86UE4 582 aaKnown RBP6.26□□□□□ -1.41
KRT39-202ENST00000578029 ZBTB46Q86UZ6 589 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 EXOC8Q8IYI6 725 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 MYO1HQ8N1T3 1032 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 CHMP4CQ96CF2 233 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 TRIM11Q96F44 468 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 COX4I2Q96KJ9 171 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 ZFYVE21Q9BQ24 234 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 ASCC2Q9H1I8 757 aaPredicted RBP6.26□□□□□ -1.41
KRT39-202ENST00000578029 AASDHPPTQ9NRN7 309 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 ZIM2Q9NZV7 527 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 SAMD15Q9P1V8 674 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 KCNH3Q9ULD8 1083 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 RNF112Q9ULX5 631 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 PCDHA9Q9Y5H5 950 aa6.26□□□□□ -1.41
KRT39-202ENST00000578029 F8W735 103 aaPredicted RBP6.25□□□□□ -1.41
KRT39-202ENST00000578029 NEMP1O14524 444 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 SIGLEC6O43699 453 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 APBA3O96018 575 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 GUCY1A3Q02108 690 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 PIN1Q13526 163 aaPredicted RBP6.25□□□□□ -1.41
KRT39-202ENST00000578029 SNW1Q13573 536 aaKnown RBP6.25□□□□□ -1.41
KRT39-202ENST00000578029 HLTFQ14527 1009 aaKnown RBP eCLIP6.25□□□□□ -1.41
KRT39-202ENST00000578029 LRRC41Q15345 812 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 DPY19L1Q2PZI1 675 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 CWF19L1Q69YN2 538 aaKnown RBP6.25□□□□□ -1.41
KRT39-202ENST00000578029 IFNL3Q8IZI9 196 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 AGGF1Q8N302 714 aaeCLIP6.25□□□□□ -1.41
KRT39-202ENST00000578029 NEDD1Q8NHV4 660 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 PMM1Q92871 262 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 PSMG3-AS1Q96PY0 264 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 YIPF4Q9BSR8 244 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 PLVAPQ9BX97 442 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 CEP41Q9BYV8 373 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 CCDC8Q9H0W5 538 aaPredicted RBP6.25□□□□□ -1.41
KRT39-202ENST00000578029 ENAMQ9NRM1 1142 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 CHST7Q9NS84 486 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 TPX2Q9ULW0 747 aaKnown RBP6.25□□□□□ -1.41
KRT39-202ENST00000578029 ASXL2Q76L83 1435 aa6.25□□□□□ -1.41
KRT39-202ENST00000578029 PLIN1O60240 522 aa6.24□□□□□ -1.41
KRT39-202ENST00000578029 KRT18P05783 430 aaKnown RBP6.24□□□□□ -1.41
KRT39-202ENST00000578029 GSNP06396 782 aa6.24□□□□□ -1.41
KRT39-202ENST00000578029 ATF3P18847 181 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms