RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 NFXL1Q6ZNB6 911 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PRRT2Q7Z6L0 340 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CLEC10AQ8IUN9 316 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 LLPHQ9BRT6 129 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 MAD2L2Q9UI95 211 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 NDUFB10O96000 172 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 INHAP05111 366 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 KIF5BP33176 963 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GNAQP50148 359 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FUT2Q10981 343 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SCRN1Q12765 414 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 MOGSQ13724 837 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 NTRK3Q16288 839 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SLFN13Q68D06 897 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GTF3C6Q969F1 213 aa12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 WDR46O15213 610 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ADCY3O60266 1144 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 LARGE1O95461 756 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 IFNAR1P17181 557 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CDC27P30260 824 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MTMR2Q13614 643 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CCDC84Q86UT8 332 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 LRRC47Q8N1G4 583 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SLC45A1Q9Y2W3 748 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MGAMO43451 1857 aa12.95□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 BMP3P12645 472 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ADD1P35611 737 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SLC1A4P43007 532 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ATP2B2Q01814 1243 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SNAPC2Q13487 334 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 IRF5Q13568 498 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 BECN1Q14457 450 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 RTN1Q16799 776 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 HSCBQ8IWL3 235 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MTMR8Q96EF0 704 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ADAMTS5Q9UNA0 930 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PTPRFP10586 1907 aa12.94□□□□□ -0.34
CDK5RAP3-204ENST00000577664 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 GOLGA8BA8MQT2 603 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 KLRF2D3W0D1 207 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CTDNEP1O95476 244 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FDX1P10109 184 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 BCRP11274 1271 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 VCAM1P19320 739 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FCGRTP55899 365 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 LBX2Q6XYB7 198 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CATSPERGQ6ZRH7 1159 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ANKRD23Q86SG2 305 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FAM160B2Q86V87 743 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 STAG2Q8N3U4 1231 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CHURC1Q8WUH1 139 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MYL10Q9BUA6 226 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
CDK5RAP3-204ENST00000577664 GOLGA8AA7E2F4 631 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CYTH3O43739 400 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FOSL2P15408 326 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ANP32AP39687 249 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 HMGCS2P54868 508 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 GPAT2Q6NUI2 795 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 NUP133Q8WUM0 1156 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FEZ1Q99689 392 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 RNF26Q9BY78 433 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 TTYH1Q9H313 450 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 C11orf49Q9H6J7 331 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 TMOD4Q9NZQ9 345 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 AGTPBP1Q9UPW5 1226 aa12.92□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms