RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ATP2A2P16615 1042 aaKnown RBP19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 ARMCX2Q7L311 632 aa19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 AMOTL1Q8IY63 956 aa19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 RPUSD2Q8IZ73 545 aaKnown RBP19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 DNAJC2Q99543 621 aaKnown RBP19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 TRPV6Q9H1D0 765 aa19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 MTCH2Q9Y6C9 303 aa19.6■□□□□ 0.73
CTDNEP1-211ENST00000575783 TCRBV5S4A2TA0A5A2 114 aa19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 USP17L12C9JPN9 530 aa19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 USP17L21D6R901 530 aa19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 ITGA7Q13683 1181 aa19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 C12orf60Q5U649 245 aa19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 NOC4LQ9BVI4 516 aaKnown RBP19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 ATP8A2Q9NTI2 1148 aa19.59■□□□□ 0.73
CTDNEP1-211ENST00000575783 FAM86C2PA6NEL3 165 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 TLL1O43897 1013 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 ZBED4O75132 1171 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 MBD4O95243 580 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 TNFAIP2Q03169 654 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 TMEM67Q5HYA8 995 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 KRT40Q6A162 431 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 C16orf86Q6ZW13 317 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 SLC43A3Q8NBI5 491 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 SCLYQ96I15 445 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 WNT8AQ9H1J5 351 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 RAVER2Q9HCJ3 691 aaKnown RBP19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 COG5Q9UP83 839 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 EXOC6BQ9Y2D4 811 aa19.58■□□□□ 0.72
CTDNEP1-211ENST00000575783 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 CABYRO75952 493 aa19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 CA3P07451 260 aa19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 PRPF38AQ8NAV1 312 aaKnown RBP19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 FGD4Q96M96 766 aa19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 BCL11AQ9H165 835 aa19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 IL1RAPL2Q9NP60 686 aa19.57■□□□□ 0.72
CTDNEP1-211ENST00000575783 NAV1Q8NEY1 1877 aa19.56■□□□□ 0.72
CTDNEP1-211ENST00000575783 GRIN2DO15399 1336 aa19.56■□□□□ 0.72
CTDNEP1-211ENST00000575783 B4GALT4O60513 344 aa19.56■□□□□ 0.72
CTDNEP1-211ENST00000575783 KHSRPQ92945 711 aaKnown RBP eCLIP19.56■□□□□ 0.72
CTDNEP1-211ENST00000575783 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
CTDNEP1-211ENST00000575783 ASTN1O14525 1302 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 F5H6K3 240 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 DYNC1LI2O43237 492 aaPredicted RBP19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 POU3F3P20264 500 aaPredicted RBP19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 PSMC6P62333 389 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 CNTN2Q02246 1040 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 KLRC3Q07444 240 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 TTLL4Q14679 1199 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 FSCN1Q16658 493 aaKnown RBP19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 ALYREFQ86V81 257 aaKnown RBP19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 ERC1Q8IUD2 1116 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 ARNTL2Q8WYA1 636 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 HLA-CQ95604 372 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 DDRGK1Q96HY6 314 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 KATNBL1Q9H079 304 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 AP5M1Q9H0R1 490 aa19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 COL11A1P12107 1806 aaPredicted RBP19.55■□□□□ 0.72
CTDNEP1-211ENST00000575783 EPOPA6NHQ4 379 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 ATP2A1O14983 1001 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 GPR37L1O60883 481 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 PTGS1P23219 599 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 NKX3-2P78367 333 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 DEFB128Q7Z7B8 93 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 TLK2Q86UE8 772 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 VWCEQ96DN2 955 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 C11orf16Q9NQ32 467 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 HOMER2Q9NSB8 354 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 FBXO40Q9UH90 709 aa19.54■□□□□ 0.72
CTDNEP1-211ENST00000575783 ZEB2O60315 1214 aa19.53■□□□□ 0.72
CTDNEP1-211ENST00000575783 NDUFB10O96000 172 aa19.53■□□□□ 0.72
CTDNEP1-211ENST00000575783 STK11IPQ8N1F8 1099 aa19.53■□□□□ 0.72
CTDNEP1-211ENST00000575783 CHST13Q8NET6 341 aa19.53■□□□□ 0.72
CTDNEP1-211ENST00000575783 AGBL1Q96MI9 1066 aa19.53■□□□□ 0.72
CTDNEP1-211ENST00000575783 GNEQ9Y223 722 aaKnown RBP19.53■□□□□ 0.72
CTDNEP1-211ENST00000575783 CTR9Q6PD62 1173 aa19.52■□□□□ 0.72
CTDNEP1-211ENST00000575783 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.72
CTDNEP1-211ENST00000575783 SLC38A10Q9HBR0 1119 aa19.52■□□□□ 0.72
CTDNEP1-211ENST00000575783 CLIP2Q9UDT6 1046 aa19.52■□□□□ 0.72
CTDNEP1-211ENST00000575783 SLC4A4Q9Y6R1 1079 aa19.52■□□□□ 0.72
CTDNEP1-211ENST00000575783 PARP14Q460N5 1801 aa19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 PIEZO1Q92508 2521 aa19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 CYP2C9P11712 490 aa19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 SMPD1P17405 629 aa19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 ADD2P35612 726 aa19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 SEZ6LQ9BYH1 1024 aa19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 DDX49Q9Y6V7 483 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 PRRC2BQ5JSZ5 2229 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-211ENST00000575783 CHGBP05060 677 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 PFKMP08237 780 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.5■□□□□ 0.711e-10■■■□□ 14.6
CTDNEP1-211ENST00000575783 FTSJ3Q8IY81 847 aaKnown RBP19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 RHPN1Q8TCX5 695 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 ALDH8A1Q9H2A2 487 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms