RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 CCT2P78371 535 aaKnown RBP21.11■□□□□ 0.97
CCDC40-213ENST00000574933 SCRN1Q12765 414 aa21.11■□□□□ 0.97
CCDC40-213ENST00000574933 Q3C1V9 767 aa21.11■□□□□ 0.97
CCDC40-213ENST00000574933 SPATC1LQ9H0A9 340 aa21.11■□□□□ 0.97
CCDC40-213ENST00000574933 GPR25O00155 361 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 ICAM1P05362 532 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 CDC37Q16543 378 aaPredicted RBP21.1■□□□□ 0.97
CCDC40-213ENST00000574933 SAMD1Q6SPF0 538 aaPredicted RBP21.1■□□□□ 0.97
CCDC40-213ENST00000574933 RIOX2Q8IUF8 465 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 SHCBP1Q8NEM2 672 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 GTF3C6Q969F1 213 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 PAGR1Q9BTK6 254 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 TEX13BQ9BXU2 312 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 NCOA5Q9HCD5 579 aaKnown RBP21.1■□□□□ 0.97
CCDC40-213ENST00000574933 ZSWIM8A7E2V4 1837 aa21.1■□□□□ 0.97
CCDC40-213ENST00000574933 ZBTB5O15062 677 aa21.09■□□□□ 0.97
CCDC40-213ENST00000574933 COPB2P35606 906 aa21.09■□□□□ 0.97
CCDC40-213ENST00000574933 STAT3P40763 770 aa21.09■□□□□ 0.97
CCDC40-213ENST00000574933 CCNA1P78396 465 aa21.09■□□□□ 0.97
CCDC40-213ENST00000574933 QRICH1Q2TAL8 776 aa21.09■□□□□ 0.97
CCDC40-213ENST00000574933 NOL8Q76FK4 1167 aaKnown RBP21.09■□□□□ 0.97
CCDC40-213ENST00000574933 SNX21Q969T3 373 aa21.09■□□□□ 0.97
CCDC40-213ENST00000574933 ZNF236Q9UL36 1845 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 PNMA6FA0A0J9YX94 578 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 DHX16O60231 1041 aaKnown RBP21.08■□□□□ 0.97
CCDC40-213ENST00000574933 PEX10O60683 326 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 SLC25A27O95847 323 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 SP3Q02447 781 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 ST3GAL1Q11201 340 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 STK3Q13188 491 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 TKFCQ3LXA3 575 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.08■□□□□ 0.97
CCDC40-213ENST00000574933 CMTR1Q8N1G2 835 aaKnown RBP21.08■□□□□ 0.97
CCDC40-213ENST00000574933 MOV10L1Q9BXT6 1211 aaKnown RBP21.08■□□□□ 0.97
CCDC40-213ENST00000574933 RAVER2Q9HCJ3 691 aaKnown RBP21.08■□□□□ 0.97
CCDC40-213ENST00000574933 VAT1LQ9HCJ6 419 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 PLXNA1Q9UIW2 1896 aa21.08■□□□□ 0.97
CCDC40-213ENST00000574933 CTDP1Q9Y5B0 961 aaPredicted RBP21.08■□□□□ 0.97
CCDC40-213ENST00000574933 HSPA1AP0DMV8 641 aaKnown RBP21.07■□□□□ 0.96
CCDC40-213ENST00000574933 HSPA1BP0DMV9 641 aaKnown RBP21.07■□□□□ 0.96
CCDC40-213ENST00000574933 SNAP25P60880 206 aa21.07■□□□□ 0.96
CCDC40-213ENST00000574933 CPLX2Q6PUV4 134 aaKnown RBP21.07■□□□□ 0.96
CCDC40-213ENST00000574933 RRP36Q96EU6 259 aaKnown RBP21.07■□□□□ 0.96
CCDC40-213ENST00000574933 PIGSQ96S52 555 aa21.07■□□□□ 0.96
CCDC40-213ENST00000574933 RNF26Q9BY78 433 aaPredicted RBP21.07■□□□□ 0.96
CCDC40-213ENST00000574933 RBM27Q9P2N5 1060 aaKnown RBP21.07■□□□□ 0.96
CCDC40-213ENST00000574933 CPLX1O14810 134 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 PRPF3O43395 683 aaKnown RBP21.06■□□□□ 0.96
CCDC40-213ENST00000574933 LACTBP83111 547 aaPredicted RBP21.06■□□□□ 0.96
CCDC40-213ENST00000574933 TRAF1Q13077 416 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 SNRNP48Q6IEG0 339 aaKnown RBP21.06■□□□□ 0.96
CCDC40-213ENST00000574933 CCDC174Q6PII3 467 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 CPXCR1Q8N123 301 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 NECAB1Q8N987 351 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 TMX3Q96JJ7 454 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 AGBL1Q96MI9 1066 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 MROH8Q9H579 483 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 LCTP09848 1927 aa21.06■□□□□ 0.96
CCDC40-213ENST00000574933 FOXN1O15353 648 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 PPP1R11O60927 126 aaPredicted RBP21.05■□□□□ 0.96
CCDC40-213ENST00000574933 FKTNO75072 461 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 CDKL5O76039 1030 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 CTDNEP1O95476 244 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 HSPA8P11142 646 aaKnown RBP21.05■□□□□ 0.96
CCDC40-213ENST00000574933 MAPK4P31152 587 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 FBXO11Q86XK2 927 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 CCDC82Q8N4S0 544 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 CHST13Q8NET6 341 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 AMNQ9BXJ7 453 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 MAF1Q9H063 256 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 PORCNQ9H237 461 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 CCPG1Q9ULG6 757 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 RIPK3Q9Y572 518 aa21.05■□□□□ 0.96
CCDC40-213ENST00000574933 STK36Q9NRP7 1315 aa21.04■□□□□ 0.96
CCDC40-213ENST00000574933 FMNL1O95466 1100 aaPredicted RBP21.04■□□□□ 0.96
CCDC40-213ENST00000574933 ERCC3P19447 782 aa21.04■□□□□ 0.96
CCDC40-213ENST00000574933 PLS1Q14651 629 aa21.04■□□□□ 0.96
CCDC40-213ENST00000574933 ZNF296Q8WUU4 475 aaPredicted RBP21.04■□□□□ 0.96
CCDC40-213ENST00000574933 LLPHQ9BRT6 129 aaKnown RBP21.04■□□□□ 0.96
CCDC40-213ENST00000574933 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
CCDC40-213ENST00000574933 TSKSQ9UJT2 592 aa21.04■□□□□ 0.96
CCDC40-213ENST00000574933 V9GY48 417 aaPredicted RBP21.04■□□□□ 0.96
CCDC40-213ENST00000574933 ABCB11O95342 1321 aa21.04■□□□□ 0.96
CCDC40-213ENST00000574933 hCG_1984214I3L0E3 225 aa21.03■□□□□ 0.96
CCDC40-213ENST00000574933 CTCFP49711 727 aaPredicted RBP21.03■□□□□ 0.96
CCDC40-213ENST00000574933 PKN1Q16512 942 aa21.03■□□□□ 0.96
CCDC40-213ENST00000574933 HOMER1Q86YM7 354 aa21.03■□□□□ 0.96
CCDC40-213ENST00000574933 ZNF713Q8N859 430 aaPredicted RBP21.03■□□□□ 0.96
CCDC40-213ENST00000574933 NSUN7Q8NE18 718 aaKnown RBP21.03■□□□□ 0.96
CCDC40-213ENST00000574933 ERO1AQ96HE7 468 aa21.03■□□□□ 0.96
CCDC40-213ENST00000574933 FBXO40Q9UH90 709 aa21.03■□□□□ 0.96
CCDC40-213ENST00000574933 CTGFP29279 349 aa21.02■□□□□ 0.96
CCDC40-213ENST00000574933 SSRP1Q08945 709 aaKnown RBP21.02■□□□□ 0.96
CCDC40-213ENST00000574933 PFKFB3Q16875 520 aaPredicted RBP21.02■□□□□ 0.96
CCDC40-213ENST00000574933 CCDC83Q8IWF9 413 aa21.02■□□□□ 0.96
CCDC40-213ENST00000574933 TRIM22Q8IYM9 498 aa21.02■□□□□ 0.96
CCDC40-213ENST00000574933 PHKBQ93100 1093 aa21.02■□□□□ 0.96
CCDC40-213ENST00000574933 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
CCDC40-213ENST00000574933 STRNO43815 780 aa21.01■□□□□ 0.95
CCDC40-213ENST00000574933 ALAS1P13196 640 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms