RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.05■□□□□ 0.48
CTNS-209ENST00000574776 KLHDC9Q8NEP7 349 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 EVI5LQ96CN4 794 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 GMCL1Q96IK5 515 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 FGD4Q96M96 766 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 AGBL1Q96MI9 1066 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 FAM161BQ96MY7 647 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 STX8Q9UNK0 236 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
CTNS-209ENST00000574776 LAMA2P24043 3122 aaKnown RBP18.04■□□□□ 0.48
CTNS-209ENST00000574776 DUSP11O75319 330 aaKnown RBP18.04■□□□□ 0.48
CTNS-209ENST00000574776 CLTBP09497 229 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 SNAP25P60880 206 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 CCDC144BQ3MJ40 725 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
CTNS-209ENST00000574776 RCSD1Q6JBY9 416 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 KCTD1Q719H9 257 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 FAM160B2Q86V87 743 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 ABHD16BQ9H3Z7 469 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 STARD7Q9NQZ5 370 aa18.04■□□□□ 0.48
CTNS-209ENST00000574776 ZNF536O15090 1300 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 MCM3APO60318 1980 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 MYADML2A6NDP7 307 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 DLL1O00548 723 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 RANBP6O60518 1105 aaKnown RBP18.03■□□□□ 0.48
CTNS-209ENST00000574776 PDE1AP54750 535 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 CCSAPQ6IQ19 270 aaPredicted RBP18.03■□□□□ 0.48
CTNS-209ENST00000574776 ARMCX2Q7L311 632 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 CCDC144CPQ8IYA2 1237 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 NUP133Q8WUM0 1156 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 ACAD9Q9H845 621 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 TMEM39AQ9NV64 488 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 MTMR7Q9Y216 660 aa18.03■□□□□ 0.48
CTNS-209ENST00000574776 A0A0C4DFX4 3053 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 MOXD2PA6NHM9 499 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 KIAA0355O15063 1070 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 ADCY6O43306 1168 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 C6orf222P0C671 652 aaPredicted RBP18.02■□□□□ 0.48
CTNS-209ENST00000574776 RAG1P15918 1043 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 FAAP100Q0VG06 881 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 CCDC174Q6PII3 467 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 TRERF1Q96PN7 1200 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 HELLSQ9NRZ9 838 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 RNF146Q9NTX7 359 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 ANAPC4Q9UJX5 808 aa18.02■□□□□ 0.48
CTNS-209ENST00000574776 SOWAHBA6NEL2 793 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 DCDC2CA8MYV0 355 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 PLA2G6O60733 806 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 ALAS1P13196 640 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 EPHB4P54760 987 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
CTNS-209ENST00000574776 ALX1Q15699 326 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 ANKRD33Q7Z3H0 272 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 VTI1AQ96AJ9 217 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 FAM227BQ96M60 508 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 TOX2Q96NM4 488 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 GUCD1Q96NT3 240 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 SPC25Q9HBM1 224 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 A1CFQ9NQ94 594 aaKnown RBP18.01■□□□□ 0.47
CTNS-209ENST00000574776 PRR12Q9ULL5 1215 aa18.01■□□□□ 0.47
CTNS-209ENST00000574776 FGAP02671 866 aa18■□□□□ 0.47
CTNS-209ENST00000574776 ASGR1P07306 291 aa18■□□□□ 0.47
CTNS-209ENST00000574776 GJA9P57773 515 aa18■□□□□ 0.47
CTNS-209ENST00000574776 TKFCQ3LXA3 575 aa18■□□□□ 0.47
CTNS-209ENST00000574776 MCMDC2Q4G0Z9 681 aa18■□□□□ 0.47
CTNS-209ENST00000574776 GNASQ5JWF2 1037 aa18■□□□□ 0.47
CTNS-209ENST00000574776 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
CTNS-209ENST00000574776 PCSK9Q8NBP7 692 aaKnown RBP18■□□□□ 0.47
CTNS-209ENST00000574776 GLT1D1Q96MS3 346 aa18■□□□□ 0.47
CTNS-209ENST00000574776 KATNBL1Q9H079 304 aa18■□□□□ 0.47
CTNS-209ENST00000574776 TOMM22Q9NS69 142 aa18■□□□□ 0.47
CTNS-209ENST00000574776 A0A0D9SFI3 127 aa17.99■□□□□ 0.47
CTNS-209ENST00000574776 ORC4O43929 436 aa17.99■□□□□ 0.47
CTNS-209ENST00000574776 FGRP09769 529 aa17.99■□□□□ 0.47
CTNS-209ENST00000574776 CST5P28325 142 aaPredicted RBP17.99■□□□□ 0.47
CTNS-209ENST00000574776 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
CTNS-209ENST00000574776 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
CTNS-209ENST00000574776 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
CTNS-209ENST00000574776 UPF3AQ9H1J1 476 aaKnown RBP17.99■□□□□ 0.47
CTNS-209ENST00000574776 ELP1O95163 1332 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.98■□□□□ 0.47
CTNS-209ENST00000574776 SLC16A2P36021 539 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 NOVP48745 357 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 CDK7P50613 346 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 TNFAIP2Q03169 654 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 FPGSQ05932 587 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 CCDC96Q2M329 555 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 TTBK2Q6IQ55 1244 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 SEMA6BQ9H3T3 888 aa17.98■□□□□ 0.47
CTNS-209ENST00000574776 DDX49Q9Y6V7 483 aaKnown RBP17.98■□□□□ 0.47
CTNS-209ENST00000574776 ASB14A6NK59 587 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 TRIM6-TRIM34B2RNG4 842 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 CTAGE5O15320 804 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
CTNS-209ENST00000574776 SMAD3P84022 425 aaKnown RBP17.97■□□□□ 0.47
CTNS-209ENST00000574776 BEX3Q00994 111 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms