RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 TRAF1Q13077 416 aa18.25■□□□□ 0.51
CCNE1-204ENST00000574121 TKFCQ3LXA3 575 aa18.25■□□□□ 0.51
CCNE1-204ENST00000574121 SNRNP48Q6IEG0 339 aaKnown RBP18.25■□□□□ 0.51
CCNE1-204ENST00000574121 CCDC144CPQ8IYA2 1237 aa18.25■□□□□ 0.51
CCNE1-204ENST00000574121 CPXCR1Q8N123 301 aa18.25■□□□□ 0.51
CCNE1-204ENST00000574121 RAVER2Q9HCJ3 691 aaKnown RBP18.25■□□□□ 0.51
CCNE1-204ENST00000574121 ZBTB5O15062 677 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 CYTH3O43739 400 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 PEX10O60683 326 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 ERCC3P19447 782 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 PSMC4P43686 418 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 CDC37Q16543 378 aaPredicted RBP18.24■□□□□ 0.51
CCNE1-204ENST00000574121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCNE1-204ENST00000574121 RAB11FIP4Q86YS3 637 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 CHST13Q8NET6 341 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 PORCNQ9H237 461 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 CPVLQ9H3G5 476 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 FAM217BQ9NTX9 383 aaPredicted RBP18.24■□□□□ 0.51
CCNE1-204ENST00000574121 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
CCNE1-204ENST00000574121 TNPO2O14787 897 aaKnown RBP18.23■□□□□ 0.51
CCNE1-204ENST00000574121 STRNO43815 780 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 PLEKHA8P1O95397 391 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
CCNE1-204ENST00000574121 HOXD10P28358 340 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 CDC27P30260 824 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 PRMT2P55345 433 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 SLC35G1Q2M3R5 365 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 ABRAQ8N0Z2 381 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 SRBD1Q8N5C6 995 aaKnown RBP18.23■□□□□ 0.51
CCNE1-204ENST00000574121 COA7Q96BR5 231 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 RRP36Q96EU6 259 aaKnown RBP18.23■□□□□ 0.51
CCNE1-204ENST00000574121 TRIM47Q96LD4 638 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 MAF1Q9H063 256 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 EFCC1Q9HA90 598 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 CCPG1Q9ULG6 757 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 TPCN1Q9ULQ1 816 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 PCNTO95613 3336 aa18.23■□□□□ 0.51
CCNE1-204ENST00000574121 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 FUT2Q10981 343 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 QRICH1Q2TAL8 776 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 CPLX2Q6PUV4 134 aaKnown RBP18.22■□□□□ 0.51
CCNE1-204ENST00000574121 GPR142Q7Z601 462 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 PLEKHH3Q7Z736 793 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 NCAPG2Q86XI2 1143 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 SOCS4Q8WXH5 440 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 AGBL1Q96MI9 1066 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 AMNQ9BXJ7 453 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 SLKQ9H2G2 1235 aaPredicted RBP18.22■□□□□ 0.51
CCNE1-204ENST00000574121 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
CCNE1-204ENST00000574121 VAT1LQ9HCJ6 419 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
CCNE1-204ENST00000574121 SEC63Q9UGP8 760 aaKnown RBP18.22■□□□□ 0.51
CCNE1-204ENST00000574121 LIMCH1Q9UPQ0 1083 aa18.22■□□□□ 0.51
CCNE1-204ENST00000574121 PFKFB2O60825 505 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 CTGFP29279 349 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 ADD1P35611 737 aaKnown RBP18.21■□□□□ 0.51
CCNE1-204ENST00000574121 MCM2P49736 904 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 SNAP25P60880 206 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 FBXO11Q86XK2 927 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 ZSCAN31Q96LW9 406 aaPredicted RBP18.21■□□□□ 0.51
CCNE1-204ENST00000574121 PIGSQ96S52 555 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 ARHGAP39Q9C0H5 1083 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 RIPK3Q9Y572 518 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 CNTNAP5Q8WYK1 1306 aa18.21■□□□□ 0.51
CCNE1-204ENST00000574121 SLC15A5A6NIM6 579 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 CPLX1O14810 134 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 FCER1AP12319 257 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 IFNAR1P17181 557 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
CCNE1-204ENST00000574121 PKN2Q16513 984 aaKnown RBP18.2■□□□□ 0.5
CCNE1-204ENST00000574121 OTOP1Q7RTM1 612 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 CTU1Q7Z7A3 348 aaKnown RBP18.2■□□□□ 0.5
CCNE1-204ENST00000574121 HOMER1Q86YM7 354 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
CCNE1-204ENST00000574121 ACAD9Q9H845 621 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 SH2B1Q9NRF2 756 aaPredicted RBP18.2■□□□□ 0.5
CCNE1-204ENST00000574121 RNF146Q9NTX7 359 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 SRRDQ9UH36 339 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 ABCB11O95342 1321 aa18.2■□□□□ 0.5
CCNE1-204ENST00000574121 COL11A1P12107 1806 aaPredicted RBP18.19■□□□□ 0.5
CCNE1-204ENST00000574121 CDKL5O76039 1030 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 ALAS1P13196 640 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 PTPREP23469 700 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 GRB14Q14449 540 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 KCTD2Q14681 263 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 NTRK3Q16288 839 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 MORN1Q5T089 497 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 WDR78Q5VTH9 848 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 CMTR1Q8N1G2 835 aaKnown RBP18.19■□□□□ 0.5
CCNE1-204ENST00000574121 TRERF1Q96PN7 1200 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 NUDT12Q9BQG2 462 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
CCNE1-204ENST00000574121 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
CCNE1-204ENST00000574121 TRIM17Q9Y577 477 aa18.19■□□□□ 0.5
CCNE1-204ENST00000574121 hCG_1984214I3L0E3 225 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 CAP1Q01518 475 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms