RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PCDHA6Q9UN73 950 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 PCDHA8Q9Y5H6 950 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 SMTNL1A8MU46 457 aa18.08■□□□□ 0.48
USP43-204ENST00000573955 ACTN4O43707 911 aaKnown RBP18.08■□□□□ 0.48
USP43-204ENST00000573955 HLA-DOAP06340 250 aa18.08■□□□□ 0.48
USP43-204ENST00000573955 BMP6P22004 513 aa18.08■□□□□ 0.48
USP43-204ENST00000573955 ATP2C1P98194 919 aaPredicted RBP18.08■□□□□ 0.48
USP43-204ENST00000573955 RGPD3A6NKT7 1758 aaPredicted RBP18.08■□□□□ 0.48
USP43-204ENST00000573955 RGPD4Q7Z3J3 1758 aa18.08■□□□□ 0.48
USP43-204ENST00000573955 PPIP5K2O43314 1243 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 SMC2O95347 1197 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 PDHBP11177 359 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 HSP90AA4PQ58FG1 418 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 MUM1L1Q5H9M0 696 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 SARM1Q6SZW1 724 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 RRP36Q96EU6 259 aaKnown RBP18.07■□□□□ 0.48
USP43-204ENST00000573955 SH3GLB2Q9NR46 395 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 SEC63Q9UGP8 760 aaKnown RBP18.07■□□□□ 0.48
USP43-204ENST00000573955 DDTLA6NHG4 134 aaPredicted RBP18.07■□□□□ 0.48
USP43-204ENST00000573955 MYO1CO00159 1063 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 IL17AQ16552 155 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 GOLGA6L1Q8N7Z2 621 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 ZDHHC15Q96MV8 337 aa18.07■□□□□ 0.48
USP43-204ENST00000573955 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.07■□□□□ 0.48
USP43-204ENST00000573955 HOOK1Q9UJC3 728 aaKnown RBP18.07■□□□□ 0.48
USP43-204ENST00000573955 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.07■□□□□ 0.48
USP43-204ENST00000573955 KCNA3P22001 575 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 NCAPHQ15003 741 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 SYT10Q6XYQ8 523 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 FERMT2Q96AC1 680 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 ST7Q9NRC1 585 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 MAN1B1Q9UKM7 699 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 BMP15O95972 392 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 ATP1A3P13637 1013 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.06■□□□□ 0.48
USP43-204ENST00000573955 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 LZTS2Q9BRK4 669 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 DNAJC18Q9H819 358 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 DONSONQ9NYP3 566 aa18.06■□□□□ 0.48
USP43-204ENST00000573955 BPIFA3Q9BQP9 254 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 TDRD3Q9H7E2 651 aaKnown RBP18.05■□□□□ 0.48
USP43-204ENST00000573955 IFNKQ9P0W0 207 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 MYH8P13535 1937 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 SMCO2A6NFE2 343 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 TTLL1O95922 423 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 NAA30Q147X3 362 aaPredicted RBP18.05■□□□□ 0.48
USP43-204ENST00000573955 NBPF20Q3BBV1 942 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 FAM198AQ9UFP1 575 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 JRKLQ9Y4A0 524 aa18.05■□□□□ 0.48
USP43-204ENST00000573955 YDJCA8MPS7 323 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 M0R2N6 131 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 TRIM66O15016 1216 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 RAD17O75943 681 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 SLC16A2P36021 539 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 TRAPPC10P48553 1259 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 COA7Q96BR5 231 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 MRFAP1L1Q96HT8 127 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 XPO4Q9C0E2 1151 aaKnown RBP18.04■□□□□ 0.48
USP43-204ENST00000573955 SWAP70Q9UH65 585 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
USP43-204ENST00000573955 TPM3P06753 285 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 KMT5BQ4FZB7 885 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 TTLL6Q8N841 843 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 TMEM60Q9H2L4 133 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 ZNF446Q9NWS9 450 aa18.04■□□□□ 0.48
USP43-204ENST00000573955 IGKV6D-41A0A0C4DH26 115 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 TPM4P67936 248 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 PTPN21Q16825 1174 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 SOGA3Q5TF21 947 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 KCTD1Q719H9 257 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 TRMT44Q8IYL2 757 aaKnown RBP18.03■□□□□ 0.48
USP43-204ENST00000573955 CACTINQ8WUQ7 758 aaKnown RBP18.03■□□□□ 0.48
USP43-204ENST00000573955 BIN2Q9UBW5 565 aaPredicted RBP18.03■□□□□ 0.48
USP43-204ENST00000573955 NOVP48745 357 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 DRC1Q96MC2 740 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 TMEM260Q9NX78 707 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
USP43-204ENST00000573955 PLIN4Q96Q06 1357 aa18.03■□□□□ 0.48
USP43-204ENST00000573955 PP2D1A8MPX8 630 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 MYL5Q02045 173 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 LETM2Q2VYF4 491 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 CCDC112Q8NEF3 446 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 PAGE5Q96GU1 130 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 HSD3B7Q9H2F3 369 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 BLZF1Q9H2G9 400 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 GDF11O95390 407 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 CDC25BP30305 580 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 C4orf32Q8N8J7 132 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 PLIN2Q99541 437 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms