RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 OR52Z1P0C646 297 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 TECP42680 631 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 FKBP1AP62942 108 aaKnown RBP11.38□□□□□ -0.59
SMG6-213ENST00000573166 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 GINS2Q9Y248 185 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 EIF2AK2P19525 551 aaKnown RBP11.38□□□□□ -0.59
SMG6-213ENST00000573166 QRICH1Q2TAL8 776 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 TTBK2Q6IQ55 1244 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 EEPD1Q7L9B9 569 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 TPH2Q8IWU9 490 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 GPRC5DQ9NZD1 345 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 ANAPC4Q9UJX5 808 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
SMG6-213ENST00000573166 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 KIF23Q02241 960 aaPredicted RBP11.37□□□□□ -0.59
SMG6-213ENST00000573166 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 FKBP15Q5T1M5 1219 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 CABP7Q86V35 215 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 ADGRF4Q8IZF3 695 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMG6-213ENST00000573166 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 C19orf81C9J6K1 198 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 INPP5BP32019 993 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 ANTXR2P58335 489 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 ZSCAN23Q3MJ62 389 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 RNF207Q6ZRF8 634 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 MAEAQ7L5Y9 396 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 LPAR1Q92633 364 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 DDX4Q9NQI0 724 aaKnown RBP11.37□□□□□ -0.59
SMG6-213ENST00000573166 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
SMG6-213ENST00000573166 CAP2P40123 477 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 COG2Q14746 738 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 PFKFB3Q16875 520 aaPredicted RBP11.36□□□□□ -0.59
SMG6-213ENST00000573166 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 RAD51AP2Q09MP3 1159 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 HSP90AA4PQ58FG1 418 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 HS2ST1Q7LGA3 356 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 UBE2Q2Q8WVN8 375 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 STAMQ92783 540 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 GLIS2Q9BZE0 524 aaPredicted RBP11.36□□□□□ -0.59
SMG6-213ENST00000573166 DEF6Q9H4E7 631 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 FBXO40Q9UH90 709 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 CLCN1P35523 988 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 STAT3P40763 770 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 TRAPPC10P48553 1259 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 USP17L6PQ6QN14 398 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 SLFN12Q8IYM2 578 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 NWD2Q9ULI1 1742 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 WDR46O15213 610 aaKnown RBP11.36□□□□□ -0.59
SMG6-213ENST00000573166 ZNF202O95125 648 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 CAVIN2O95810 425 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 SNAPC2Q13487 334 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 SEPT14Q6ZU15 432 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 SCYL3Q8IZE3 742 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 ZNF592Q92610 1267 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
SMG6-213ENST00000573166 NCBP1Q09161 790 aaKnown RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 CETN1Q12798 172 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 TEKT3Q9BXF9 490 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 PCDHAC2Q9Y5I4 1007 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 SRBD1Q8N5C6 995 aaKnown RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 GBA2Q9HCG7 927 aaPredicted RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 ZHX1Q9UKY1 873 aaPredicted RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 GADD45BO75293 160 aaPredicted RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 FDX1P10109 184 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 CYP4A11Q02928 519 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 TAF1CQ15572 869 aaPredicted RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 NOM1Q5C9Z4 860 aaKnown RBP11.35□□□□□ -0.59
SMG6-213ENST00000573166 ZFYVE27Q5T4F4 411 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 ADALQ6DHV7 355 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 ACER1Q8TDN7 264 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 KIF2CQ99661 725 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 MRIQ9BWK5 157 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 NT5C3AQ9H0P0 336 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 DNAJC25Q9H1X3 360 aa11.35□□□□□ -0.59
SMG6-213ENST00000573166 PDHBP11177 359 aa11.34□□□□□ -0.59
SMG6-213ENST00000573166 GCFC2P16383 781 aaKnown RBP11.34□□□□□ -0.59
SMG6-213ENST00000573166 STX17P56962 302 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms