RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 INAVAQ3KP66 663 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 TRIM61Q5EBN2 209 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 IQSEC1Q6DN90 963 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ITPRIPL1Q6GPH6 555 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ZNF449Q6P9G9 518 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 VHLLQ6RSH7 139 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 TPTE2Q6XPS3 522 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 DTHD1Q6ZMT9 781 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 SPOCD1Q6ZMY3 1216 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 RUFY4Q6ZNE9 571 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 EGFL6Q8IUX8 553 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 SCUBE3Q8IX30 993 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 C7orf31Q8N865 590 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ZFPM2Q8WW38 1151 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ANP32BQ92688 251 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 PMEPA1Q969W9 287 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 FERMT2Q96AC1 680 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 CENPTQ96BT3 561 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM193BQ96PV7 902 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 KCTD15Q96SI1 283 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ELP3Q9H9T3 547 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 RSAD1Q9HA92 442 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 PLEKHA5Q9HAU0 1116 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ZCCHC17Q9NP64 241 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 FNIP2Q9P278 1114 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 TMEM98Q9Y2Y6 226 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 SYNDIG1LA6NDD5 238 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 TRIM64A6NGJ6 449 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 TRIM64BA6NI03 449 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 ERVH48-1M5A8F1 160 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 OPA1O60313 960 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 KPNA6O60684 536 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 TIPRLO75663 272 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 INMTO95050 263 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 IL33O95760 270 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 HRGP04196 525 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 GUCY2CP25092 1073 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 ELF1P32519 619 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 SCNN1BP51168 640 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 NAP1L1P55209 391 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 SUMO1P63165 101 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 TNFAIP2Q03169 654 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 GRM1Q13255 1194 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 IFIT5Q13325 482 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 HIF1AQ16665 826 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 LRRFIP1Q32MZ4 808 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 CC2D1BQ5T0F9 858 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 TMCO3Q6UWJ1 677 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 REC114Q7Z4M0 266 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 CMTR2Q8IYT2 770 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 MYCT1Q8N699 235 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 SLC35G2Q8TBE7 412 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 SH3KBP1Q96B97 665 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 ANP32EQ9BTT0 268 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 PHACTR1Q9C0D0 580 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 MIR1-1HGQ9H1L0 117 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM204AQ9H8W3 233 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 EFCC1Q9HA90 598 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 CRTAC1Q9NQ79 661 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 SEPT9Q9UHD8 586 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 XPO7Q9UIA9 1087 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 MKL2Q9ULH7 1088 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 PPP1R9AQ9ULJ8 1098 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 DNM3Q9UQ16 869 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 CRYL1Q9Y2S2 319 aa5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 TNPO3Q9Y5L0 923 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-210ENST00000572787 A0A1W2PP55 124 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 LRRC10BA6NIK2 292 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 FZD9O00144 591 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 TPP1O14773 563 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 EREGO14944 169 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 KHNYNO15037 678 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 PQBP1O60828 265 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 CILPO75339 1184 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 MT-CO1P00395 513 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 CFBP00751 764 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 APPP05067 770 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 GRK2P25098 689 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 ANP32AP39687 249 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 IARSP41252 1262 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 TNNT2P45379 298 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 ID4P47928 161 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 KLF1Q13351 362 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 HSP90AA2PQ14568 343 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 PCBP2Q15366 365 aaKnown RBP eCLIP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 PTPN14Q15678 1187 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 UVSSAQ2YD98 709 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 ISM2Q6H9L7 571 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 UBE2R2Q712K3 238 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 CYP2U1Q7Z449 544 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 NBPF5PQ86XG9 351 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 ZNF513Q8N8E2 541 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 ZSCAN1Q8NBB4 408 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 BTN2A2Q8WVV5 523 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 FOXJ1Q92949 421 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 USP13Q92995 863 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 HIC2Q96JB3 615 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 UBXN10Q96LJ8 280 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 RNF38Q9H0F5 515 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 PHAXQ9H814 394 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms