RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 RALGPS1Q5JS13 557 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 ZBTB37Q5TC79 503 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 CDCP2Q5VXM1 449 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 ZNF746Q6NUN9 644 aaPredicted RBP4.29□□□□□ -1.72
RPA1-204ENST00000571725 GIMAP6Q6P9H5 292 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 MPRIPQ6WCQ1 1025 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 EEPD1Q7L9B9 569 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 MCATQ8IVS2 390 aaKnown RBP4.29□□□□□ -1.72
RPA1-204ENST00000571725 SLFN12Q8IYM2 578 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 PHACTR4Q8IZ21 702 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 PANK1Q8TE04 598 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 HNRNPLLQ8WVV9 542 aaKnown RBP4.29□□□□□ -1.72
RPA1-204ENST00000571725 ZNF669Q96BR6 464 aaPredicted RBP4.29□□□□□ -1.72
RPA1-204ENST00000571725 EPN3Q9H201 632 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 SLKQ9H2G2 1235 aaPredicted RBP4.29□□□□□ -1.72
RPA1-204ENST00000571725 KLHL3Q9UH77 587 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 MAPK8IP1Q9UQF2 711 aa4.29□□□□□ -1.72
RPA1-204ENST00000571725 CADPSQ9ULU8 1353 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 PDPK1O15530 556 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 NEFMP07197 916 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 HSP90B1P14625 803 aaKnown RBP4.28□□□□□ -1.72
RPA1-204ENST00000571725 NME1P15531 152 aaKnown RBP4.28□□□□□ -1.72
RPA1-204ENST00000571725 HSD3B2P26439 372 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 GBP1P32455 592 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 RASGRF1Q13972 1273 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 MTERF2Q49AM1 385 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 OVOS1Q6IE37 1185 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 SDE2Q6IQ49 451 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 MRPL41Q8IXM3 137 aaKnown RBP4.28□□□□□ -1.72
RPA1-204ENST00000571725 MFSD4AQ8N468 514 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 FAM13CQ8NE31 585 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 ST13P5Q8NFI4 369 aaPredicted RBP4.28□□□□□ -1.72
RPA1-204ENST00000571725 UBE2FQ969M7 185 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 DACT3Q96B18 629 aaPredicted RBP4.28□□□□□ -1.72
RPA1-204ENST00000571725 ATG4CQ96DT6 458 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 TMEM87BQ96K49 555 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 CCDC74BQ96LY2 380 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.28□□□□□ -1.72
RPA1-204ENST00000571725 CNNM2Q9H8M5 875 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 GCM1Q9NP62 436 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 TPX2Q9ULW0 747 aaKnown RBP4.28□□□□□ -1.72
RPA1-204ENST00000571725 CSADQ9Y600 493 aa4.28□□□□□ -1.72
RPA1-204ENST00000571725 TNFRSF10CO14798 259 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 MATN3O15232 486 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 CAP2P40123 477 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 ZNF143P52747 638 aaPredicted RBP4.27□□□□□ -1.73
RPA1-204ENST00000571725 RNF4P78317 190 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 SLC7A5Q01650 507 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 RING1Q06587 406 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 RTP5Q14D33 572 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 ARSHQ5FYA8 562 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 ZC3H12BQ5HYM0 836 aaKnown RBP4.27□□□□□ -1.73
RPA1-204ENST00000571725 PPM1JQ5JR12 505 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 VHLLQ6RSH7 139 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 FAM178BQ8IXR5 827 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 FAM169BQ8N8A8 192 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 MFSD2AQ8NA29 543 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 SMARCC1Q92922 1105 aaPredicted RBP4.27□□□□□ -1.73
RPA1-204ENST00000571725 PUS7Q96PZ0 661 aaKnown RBP4.27□□□□□ -1.73
RPA1-204ENST00000571725 LUC7LQ9NQ29 371 aaKnown RBP4.27□□□□□ -1.73
RPA1-204ENST00000571725 SNTG2Q9NY99 539 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 ZSWIM5Q9P217 1185 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 CNOT11Q9UKZ1 510 aaKnown RBP4.27□□□□□ -1.73
RPA1-204ENST00000571725 PCDHGC5Q9Y5F6 944 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 CORINQ9Y5Q5 1042 aa4.27□□□□□ -1.73
RPA1-204ENST00000571725 A0A1W2PQH9 124 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 RGS13O14921 159 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 CLEC3AO75596 197 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 LRIG2O94898 1065 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 CYP7A1P22680 504 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 MAGEA10P43363 369 aaPredicted RBP4.26□□□□□ -1.73
RPA1-204ENST00000571725 CDK8P49336 464 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 GNPTABQ3T906 1256 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 UNC5AQ6ZN44 842 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 LILRA2Q8N149 483 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 LRRC47Q8N1G4 583 aaKnown RBP4.26□□□□□ -1.73
RPA1-204ENST00000571725 SYNPOQ8N3V7 929 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 OXR1Q8N573 874 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 INTS4Q96HW7 963 aaKnown RBP4.26□□□□□ -1.73
RPA1-204ENST00000571725 COX4I2Q96KJ9 171 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 IPO9Q96P70 1041 aaKnown RBP4.26□□□□□ -1.73
RPA1-204ENST00000571725 PIF1Q9H611 641 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 C19orf44Q9H6X5 657 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 ZNF552Q9H707 407 aaPredicted RBP4.26□□□□□ -1.73
RPA1-204ENST00000571725 ST7Q9NRC1 585 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 MSRB2Q9Y3D2 182 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 TBX22Q9Y458 520 aa4.26□□□□□ -1.73
RPA1-204ENST00000571725 ANKRD62A6NC57 917 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 GJB6O95452 261 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 CST3P01034 146 aaPredicted RBP4.25□□□□□ -1.73
RPA1-204ENST00000571725 ETV3P41162 512 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 RASA3Q14644 834 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 TCEAL1Q15170 157 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 UBXN11Q5T124 520 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 SFRP5Q5T4F7 317 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 RNF187Q5TA31 235 aaPredicted RBP4.25□□□□□ -1.73
RPA1-204ENST00000571725 RUFY4Q6ZNE9 571 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 THAP5Q7Z6K1 395 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 HOMER1Q86YM7 354 aa4.25□□□□□ -1.73
RPA1-204ENST00000571725 CYB5D2Q8WUJ1 264 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms