RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 REV3LO60673 3130 aa13.63□□□□□ -0.23
CHMP6-202ENST00000571457 USP17L12C9JPN9 530 aa13.62□□□□□ -0.23
CHMP6-202ENST00000571457 USP17L21D6R901 530 aa13.62□□□□□ -0.23
CHMP6-202ENST00000571457 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
CHMP6-202ENST00000571457 TFF2Q03403 129 aa13.62□□□□□ -0.23
CHMP6-202ENST00000571457 NOL8Q76FK4 1167 aaKnown RBP13.62□□□□□ -0.23
CHMP6-202ENST00000571457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHMP6-202ENST00000571457 FTSJ3Q8IY81 847 aaKnown RBP13.62□□□□□ -0.23
CHMP6-202ENST00000571457 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
CHMP6-202ENST00000571457 ADCY6O43306 1168 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 PRKAB2O43741 272 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 ZEB2O60315 1214 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 MBD4O95243 580 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
CHMP6-202ENST00000571457 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 TMEM31Q5JXX7 168 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 CHST13Q8NET6 341 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 DNAJC2Q99543 621 aaKnown RBP13.61□□□□□ -0.23
CHMP6-202ENST00000571457 LRFN3Q9BTN0 628 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
CHMP6-202ENST00000571457 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHMP6-202ENST00000571457 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 COG5Q9UP83 839 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 RIPK3Q9Y572 518 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 MCM3APO60318 1980 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 GBF1Q92538 1859 aa13.61□□□□□ -0.23
CHMP6-202ENST00000571457 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
CHMP6-202ENST00000571457 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 F5H6K3 240 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 CTAGE5O15320 804 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 PFKMP08237 780 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
CHMP6-202ENST00000571457 KCNQ1P51787 676 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 RABGGTBP53611 331 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 CCL23P55773 120 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 BEX3Q00994 111 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 KLRC3Q07444 240 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 CCDC144CPQ8IYA2 1237 aa13.6□□□□□ -0.23
CHMP6-202ENST00000571457 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
CHMP6-202ENST00000571457 BRWD1Q9NSI6 2320 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 CYP2D7A0A087X1C5 515 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 ADD2P35612 726 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 OAZ1P54368 228 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 FSCN1Q16658 493 aaKnown RBP13.59□□□□□ -0.23
CHMP6-202ENST00000571457 TMEM67Q5HYA8 995 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 NUP88Q99567 741 aaPredicted RBP13.59□□□□□ -0.23
CHMP6-202ENST00000571457 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 IL1RAPL2Q9NP60 686 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 NYAP2Q9P242 653 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 MTCH2Q9Y6C9 303 aa13.59□□□□□ -0.23
CHMP6-202ENST00000571457 ASB14A6NK59 587 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 NDUFB10O96000 172 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 IFIT2P09913 472 aaKnown RBP13.58□□□□□ -0.24
CHMP6-202ENST00000571457 FDX1P10109 184 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 FGD4Q96M96 766 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 KATNBL1Q9H079 304 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 EPHX3Q9H6B9 360 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
CHMP6-202ENST00000571457 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
CHMP6-202ENST00000571457 FEM1BQ9UK73 627 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 SLC4A4Q9Y6R1 1079 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 UMODL1Q5DID0 1318 aa13.58□□□□□ -0.24
CHMP6-202ENST00000571457 SMIM22K7EJ46 135 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 SUPT20HL2P0C7V6 817 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 ACTN1P12814 892 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 MYOGP15173 224 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP6-202ENST00000571457 WNT8AQ9H1J5 351 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 ACAD9Q9H845 621 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 MKNK2Q9HBH9 465 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
CHMP6-202ENST00000571457 Q9Y3F1 56 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
CHMP6-202ENST00000571457 DYNC1LI2O43237 492 aaPredicted RBP13.56□□□□□ -0.24
CHMP6-202ENST00000571457 TLL1O43897 1013 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 B4GALT4O60513 344 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 GPR37L1O60883 481 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 CA3P07451 260 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 UBE3CQ15386 1083 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 IQSEC1Q6DN90 963 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 HLA-CQ95604 372 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 SYNPO2Q9UMS6 1093 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms