RNA–Protein interactions for RNA: ENST00000571319.5

TOM1L1-209, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-209ENST00000571319 TTC28Q96AY4 2481 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 PTPDC1A2A3K4 754 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 CPLX1O14810 134 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 BRD1O95696 1058 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 TOP1P11387 765 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 IFNAR1P17181 557 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 RTN1Q16799 776 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 GADL1Q6ZQY3 521 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 SIAH1Q8IUQ4 282 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 CCDC144CPQ8IYA2 1237 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 NUP133Q8WUM0 1156 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 MKL1Q969V6 931 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 C11orf49Q9H6J7 331 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 KANSL2Q9H9L4 492 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 RBM28Q9NW13 759 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
TOM1L1-209ENST00000571319 EYSQ5T1H1 3165 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 PHF20L1A8MW92 1017 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 MPHOSPH10O00566 681 aaKnown RBP9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 STX6O43752 255 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 CDKL5O76039 1030 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 TTLL1O95922 423 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 PDCP20941 246 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 GUCY1A2P33402 732 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 JAG1P78504 1218 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 FAM110CQ1W6H9 321 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 ABCB5Q2M3G0 1257 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 HMX1Q9NP08 348 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 FUT2Q10981 343 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 SEPT2Q15019 361 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 FAM109BQ6ICB4 259 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 CABP5Q9NP86 173 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 KIF3AQ9Y496 699 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
TOM1L1-209ENST00000571319 SPTBN5Q9NRC6 3674 aaKnown RBP9.4□□□□□ -0.9
TOM1L1-209ENST00000571319 PLXNB2O15031 1838 aa9.4□□□□□ -0.9
TOM1L1-209ENST00000571319 SIPA1L1O43166 1804 aa9.4□□□□□ -0.9
TOM1L1-209ENST00000571319 FRMPD3Q5JV73 1810 aa9.4□□□□□ -0.9
TOM1L1-209ENST00000571319 ATAD5Q96QE3 1844 aa9.4□□□□□ -0.9
TOM1L1-209ENST00000571319 PRUNE2Q8WUY3 3088 aa9.4□□□□□ -0.9
TOM1L1-209ENST00000571319 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 PPFIA3O75145 1194 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 GDF11O95390 407 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 GH2P01242 217 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 PTPRAP18433 802 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 KIF5BP33176 963 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 CAP2P40123 477 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 GNAQP50148 359 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 GRM4Q14833 912 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 SHROOM1Q2M3G4 852 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 SRBD1Q8N5C6 995 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 PHKBQ93100 1093 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 GUCD1Q96NT3 240 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 PRDM6Q9NQX0 595 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 MAD2L2Q9UI95 211 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 AGTPBP1Q9UPW5 1226 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 MTMR6Q9Y217 621 aa9.4□□□□□ -0.91
TOM1L1-209ENST00000571319 TRIM75PA6NK02 468 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 ZSCAN22P10073 491 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 SMARCA1P28370 1054 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 CCDC82Q8N4S0 544 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 LZTS2Q9BRK4 669 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 SLC26A6Q9BXS9 759 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 GINM1Q9NU53 330 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 OGDHLQ9ULD0 1010 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 SYNPO2Q9UMS6 1093 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 AFG3L2Q9Y4W6 797 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 PFASO15067 1338 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 STK36Q9NRP7 1315 aa9.39□□□□□ -0.91
TOM1L1-209ENST00000571319 USP17L5A8MUK1 530 aa9.38□□□□□ -0.91
TOM1L1-209ENST00000571319 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-209ENST00000571319 PARP1P09874 1014 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-209ENST00000571319 PDHBP11177 359 aa9.38□□□□□ -0.91
TOM1L1-209ENST00000571319 GCLCP48506 637 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms