RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 GNASQ5JWF2 1037 aa8.79□□□□□ -1
SMG6-205ENST00000570659 FAM178BQ8IXR5 827 aa8.79□□□□□ -1
SMG6-205ENST00000570659 MB21D1Q8N884 522 aa8.79□□□□□ -1
SMG6-205ENST00000570659 HLA-CQ95604 372 aa8.79□□□□□ -1
SMG6-205ENST00000570659 VTI1AQ96AJ9 217 aa8.79□□□□□ -1
SMG6-205ENST00000570659 GLT1D1Q96MS3 346 aa8.79□□□□□ -1
SMG6-205ENST00000570659 UIMC1Q96RL1 719 aa8.79□□□□□ -1
SMG6-205ENST00000570659 C1orf115Q9H7X2 142 aa8.79□□□□□ -1
SMG6-205ENST00000570659 CABP5Q9NP86 173 aa8.79□□□□□ -1
SMG6-205ENST00000570659 DCP1AQ9NPI6 582 aaPredicted RBP8.79□□□□□ -1
SMG6-205ENST00000570659 FAM184BQ9ULE4 1060 aa8.79□□□□□ -1
SMG6-205ENST00000570659 PPP1R9AQ9ULJ8 1098 aa8.79□□□□□ -1
SMG6-205ENST00000570659 GNEQ9Y223 722 aaKnown RBP8.79□□□□□ -1
SMG6-205ENST00000570659 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
SMG6-205ENST00000570659 TECTAO75443 2155 aa8.79□□□□□ -1
SMG6-205ENST00000570659 TCRBV5S4A2TA0A5A2 114 aa8.78□□□□□ -1
SMG6-205ENST00000570659 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
SMG6-205ENST00000570659 PRR33A8MZF0 331 aa8.78□□□□□ -1
SMG6-205ENST00000570659 BCAR3O75815 825 aa8.78□□□□□ -1
SMG6-205ENST00000570659 RGS20O76081 388 aa8.78□□□□□ -1
SMG6-205ENST00000570659 SMPD1P17405 629 aa8.78□□□□□ -1
SMG6-205ENST00000570659 SLC4A3P48751 1232 aa8.78□□□□□ -1
SMG6-205ENST00000570659 NKX3-2P78367 333 aa8.78□□□□□ -1
SMG6-205ENST00000570659 ICA1Q05084 483 aa8.78□□□□□ -1
SMG6-205ENST00000570659 ITGA7Q13683 1181 aa8.78□□□□□ -1
SMG6-205ENST00000570659 KCTD2Q14681 263 aa8.78□□□□□ -1
SMG6-205ENST00000570659 IER5LQ5T953 404 aa8.78□□□□□ -1
SMG6-205ENST00000570659 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
SMG6-205ENST00000570659 ARMCX2Q7L311 632 aa8.78□□□□□ -1
SMG6-205ENST00000570659 RASGRP2Q7LDG7 609 aa8.78□□□□□ -1
SMG6-205ENST00000570659 CCDC144CPQ8IYA2 1237 aa8.78□□□□□ -1
SMG6-205ENST00000570659 TRMT2AQ8IZ69 625 aaKnown RBP8.78□□□□□ -1
SMG6-205ENST00000570659 PRSS33Q8NF86 280 aa8.78□□□□□ -1
SMG6-205ENST00000570659 CTAGE1Q96RT6 745 aa8.78□□□□□ -1
SMG6-205ENST00000570659 CNPY2Q9Y2B0 182 aa8.78□□□□□ -1
SMG6-205ENST00000570659 DCHS1Q96JQ0 3298 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.77□□□□□ -1.01
SMG6-205ENST00000570659 WDR46O15213 610 aaKnown RBP8.77□□□□□ -1.01
SMG6-205ENST00000570659 SLC25A27O95847 323 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1.01
SMG6-205ENST00000570659 DEFB103AP81534 67 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 ALDH1L2Q3SY69 923 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 TMEM67Q5HYA8 995 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 SNRNP48Q6IEG0 339 aaKnown RBP8.77□□□□□ -1.01
SMG6-205ENST00000570659 TMEM179Q6ZVK1 233 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 TTC6Q86TZ1 520 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 GJD3Q8N144 294 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 ZNF512BQ96KM6 892 aaPredicted RBP8.77□□□□□ -1.01
SMG6-205ENST00000570659 ARMT1Q9H993 441 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 RAVER2Q9HCJ3 691 aaKnown RBP8.77□□□□□ -1.01
SMG6-205ENST00000570659 MCM9Q9NXL9 1143 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 SLC5A4Q9NY91 659 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 MTUS1Q9ULD2 1270 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 CACNA1AO00555 2505 aa8.77□□□□□ -1.01
SMG6-205ENST00000570659 MYO7AQ13402 2215 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 SIP14410 1827 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 TRIP12Q14669 1992 aaPredicted RBP8.76□□□□□ -1.01
SMG6-205ENST00000570659 POTEB3A0JP26 581 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 PDE6AP16499 860 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 SNAP25P60880 206 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 AAK1Q2M2I8 961 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 TAPT1Q6NXT6 567 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 POTEBQ6S5H4 581 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 ATF7IPQ6VMQ6 1270 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 CPXCR1Q8N123 301 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 CHMP4CQ96CF2 233 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
SMG6-205ENST00000570659 TSPYL2Q9H2G4 693 aaPredicted RBP8.76□□□□□ -1.01
SMG6-205ENST00000570659 UBE2ZQ9H832 354 aaPredicted RBP8.76□□□□□ -1.01
SMG6-205ENST00000570659 SUGCTQ9HAC7 445 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 COG5Q9UP83 839 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 MROH7Q68CQ1 1323 aa8.76□□□□□ -1.01
SMG6-205ENST00000570659 SPTBN4Q9H254 2564 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 SCN10AQ9Y5Y9 1956 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 PLXNA3P51805 1871 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 KMT2EQ8IZD2 1858 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 H3BQ06 376 aaPredicted RBP8.75□□□□□ -1.01
SMG6-205ENST00000570659 TRIM27P14373 513 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 KCNA5P22460 613 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 CDK8P49336 464 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 G3BP1Q13283 466 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMG6-205ENST00000570659 FSCN1Q16658 493 aaKnown RBP8.75□□□□□ -1.01
SMG6-205ENST00000570659 EEPD1Q7L9B9 569 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 TLK2Q86UE8 772 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 FBXO16Q8IX29 292 aaPredicted RBP8.75□□□□□ -1.01
SMG6-205ENST00000570659 STK11IPQ8N1F8 1099 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 FAM133AQ8N9E0 248 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 PCSK9Q8NBP7 692 aaKnown RBP8.75□□□□□ -1.01
SMG6-205ENST00000570659 GPR108Q9NPR9 543 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 HOMER2Q9NSB8 354 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 FAM86C1Q9NVL1 165 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 ZNF536O15090 1300 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 ZNF532Q9HCE3 1301 aa8.75□□□□□ -1.01
SMG6-205ENST00000570659 MAGEB6P1A0A0J9YX57 407 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 TLR3O15455 904 aaKnown RBP8.74□□□□□ -1.01
SMG6-205ENST00000570659 DYNC1LI2O43237 492 aaPredicted RBP8.74□□□□□ -1.01
SMG6-205ENST00000570659 NDUFB10O96000 172 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 RARSP54136 660 aaKnown RBP8.74□□□□□ -1.01
SMG6-205ENST00000570659 TNFAIP2Q03169 654 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms