RNA–Protein interactions for RNA: ENST00000570623.1

TOM1L1-206, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-206ENST00000570623 UTP4Q969X6 686 aaKnown RBP7.32□□□□□ -1.24
TOM1L1-206ENST00000570623 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
TOM1L1-206ENST00000570623 PRDM14Q9GZV8 571 aa7.32□□□□□ -1.24
TOM1L1-206ENST00000570623 NOL6Q9H6R4 1146 aaKnown RBP7.32□□□□□ -1.24
TOM1L1-206ENST00000570623 LGR6Q9HBX8 967 aa7.32□□□□□ -1.24
TOM1L1-206ENST00000570623 CUX1P39880 1505 aa7.32□□□□□ -1.24
TOM1L1-206ENST00000570623 KIF13AQ9H1H9 1805 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 DLX3O60479 287 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 EFCAB14O75071 495 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 EOMESO95936 686 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 MAP4P27816 1152 aaKnown RBP7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 IREB2P48200 963 aaKnown RBP7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 GABREP78334 506 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 CDK5R2Q13319 367 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 GTF2IRD2BQ6EKJ0 949 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 GTF2IRD2Q86UP8 949 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 LRRTM3Q86VH5 581 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 FIBCD1Q8N539 461 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 TOP6BLQ8N6T0 577 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 BRF1Q92994 677 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 C1GALT1Q9NS00 363 aa7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 TPX2Q9ULW0 747 aaKnown RBP7.31□□□□□ -1.24
TOM1L1-206ENST00000570623 FAM95CA0A1B0GW59 222 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 PDGFRBP09619 1106 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 BMP3P12645 472 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 SDSP20132 328 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 POU3F3P20264 500 aaPredicted RBP7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 RXRBP28702 533 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 HOXC12P31275 282 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 GFRA1P56159 465 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 SNW1Q13573 536 aaKnown RBP7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 ADGRE1Q14246 886 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 DZIP1LQ8IYY4 767 aaKnown RBP7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 PRPF38AQ8NAV1 312 aaKnown RBP7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 GSTCDQ8NEC7 633 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 GIMAP7Q8NHV1 300 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 DUSP23Q9BVJ7 150 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 TARS2Q9BW92 718 aaKnown RBP7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 TRIM39Q9HCM9 518 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 GFOD1Q9NXC2 390 aa7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 SF3B6Q9Y3B4 125 aaKnown RBP7.3□□□□□ -1.24
TOM1L1-206ENST00000570623 CEP170Q5SW79 1584 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 S100BP04271 92 aaPredicted RBP7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 SCG5P05408 212 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 KIR3DL1P43629 444 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 MBTPS1Q14703 1052 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 PPP2R5DQ14738 602 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 NKAPLQ5M9Q1 402 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 PAOXQ6QHF9 649 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 BRAPQ7Z569 592 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 JAMLQ86YT9 394 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 FAM20CQ8IXL6 584 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 ARMC10Q8N2F6 343 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 PPM1KQ8N3J5 372 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 SLC7A14Q8TBB6 771 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 SLC52A2Q9HAB3 445 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 PRDM5Q9NQX1 630 aaPredicted RBP7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 HOMER2Q9NSB8 354 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 NDOR1Q9UHB4 597 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 MCM8Q9UJA3 840 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 KCNH3Q9ULD8 1083 aa7.29□□□□□ -1.24
TOM1L1-206ENST00000570623 SIGLEC6O43699 453 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 LRRN2O75325 713 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 DNAJC8O75937 253 aaPredicted RBP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 CPP00450 1065 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 SNRPB2P08579 225 aaKnown RBP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 CDKN1CP49918 316 aaPredicted RBP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 NFKB2Q00653 900 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 AMPD2Q01433 879 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 SFRP5Q5T4F7 317 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 CNNM4Q6P4Q7 775 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 MAMDC2Q7Z304 686 aaPredicted RBP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 FERMT3Q86UX7 667 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 DTWD2Q8NBA8 298 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 DDX1Q92499 740 aaKnown RBP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 PTPRN2Q92932 1015 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 ZDHHC15Q96MV8 337 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 FAM126AQ9BYI3 521 aaPredicted RBP7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 CYP26B1Q9NR63 512 aa7.28□□□□□ -1.24
TOM1L1-206ENST00000570623 ITIH2P19823 946 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 POU3F2P20265 443 aaPredicted RBP7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 PMLP29590 882 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 KCNJ6P48051 423 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 NMIQ13287 307 aaPredicted RBP7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 SF1Q15637 639 aaKnown RBP7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 C22orf34Q6ZV56 151 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 TMC3Q7Z5M5 1100 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 TXNRD3Q86VQ6 643 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 AHI1Q8N157 1196 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 AFAP1L2Q8N4X5 818 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 TMEM145Q8NBT3 493 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 C1orf159Q96HA4 380 aa7.27□□□□□ -1.25
TOM1L1-206ENST00000570623 MEGF10Q96KG7 1140 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms