RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 MCM9Q9NXL9 1143 aa12.02□□□□□ -0.48
LINC01654-201ENST00000569711 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.48
LINC01654-201ENST00000569711 KAT6BQ8WYB5 2073 aa12.02□□□□□ -0.48
LINC01654-201ENST00000569711 COL24A1Q17RW2 1714 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 IPO7O95373 1038 aaKnown RBP12.02□□□□□ -0.49
LINC01654-201ENST00000569711 AMPD2Q01433 879 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 CKAP4Q07065 602 aaKnown RBP12.02□□□□□ -0.49
LINC01654-201ENST00000569711 ACRBPQ8NEB7 543 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 RASSF8Q8NHQ8 419 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 PCDHA6Q9UN73 950 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 L1RE1Q9UN81 338 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 PCDHA8Q9Y5H6 950 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
LINC01654-201ENST00000569711 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 hCG_1984214I3L0E3 225 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 KRT86O43790 486 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 NMT2O60551 498 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 LDHCP07864 332 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 SRGNP10124 158 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 PPP4CP60510 307 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 MAP9Q49MG5 647 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 NAALADL2Q58DX5 795 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 IRF2BP1Q8IU81 584 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 ZNF713Q8N859 430 aaPredicted RBP12.01□□□□□ -0.49
LINC01654-201ENST00000569711 STAMQ92783 540 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 SPZ1Q9BXG8 430 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 TSGA10Q9BZW7 698 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
LINC01654-201ENST00000569711 MAD2L2Q9UI95 211 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 ANO9A1A5B4 782 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 TARSL2A2RTX5 802 aaKnown RBP12.01□□□□□ -0.49
LINC01654-201ENST00000569711 GNA11P29992 359 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 IQCEQ6IPM2 695 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 C7orf25Q9BPX7 421 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 TSPYL1Q9H0U9 437 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 MED4Q9NPJ6 270 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 EXOC1Q9NV70 894 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 CWC15Q9P013 229 aaKnown RBP12.01□□□□□ -0.49
LINC01654-201ENST00000569711 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 ABCB11O95342 1321 aa12.01□□□□□ -0.49
LINC01654-201ENST00000569711 TTC26A0AVF1 554 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
LINC01654-201ENST00000569711 POLR3GO15318 223 aaPredicted RBP12□□□□□ -0.49
LINC01654-201ENST00000569711 KLRC4O43908 158 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 TSPY3P0CV98 308 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 TSPY8P0CW00 308 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 CCNE1P24864 410 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
LINC01654-201ENST00000569711 TTI2Q6NXR4 508 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 FOXR2Q6PJQ5 311 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
LINC01654-201ENST00000569711 RUBCNQ92622 972 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 SETDB2Q96T68 719 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 SLF1Q9BQI6 1058 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 EPC1Q9H2F5 836 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 IL17RBQ9NRM6 502 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 STXBP3O00186 592 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
LINC01654-201ENST00000569711 LDHBP07195 334 aaKnown RBP12□□□□□ -0.49
LINC01654-201ENST00000569711 PRDX5P30044 214 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 ZBED6P86452 979 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 C6orf50Q9HD87 102 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 FAM205AQ6ZU69 1335 aa12□□□□□ -0.49
LINC01654-201ENST00000569711 A0A0G2JS52 829 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 EIF3CLB5ME19 914 aaKnown RBP11.99□□□□□ -0.49
LINC01654-201ENST00000569711 OR52Z1P0C646 297 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 HSP90B2PQ58FF3 399 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 C15orf52Q6ZUT6 534 aaKnown RBP11.99□□□□□ -0.49
LINC01654-201ENST00000569711 EIF3CQ99613 913 aaKnown RBP11.99□□□□□ -0.49
LINC01654-201ENST00000569711 TUBGCP2Q9BSJ2 902 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 SAR1BQ9Y6B6 198 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 IRS2Q9Y4H2 1338 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 CYP2D6P10635 497 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC01654-201ENST00000569711 CABP7Q86V35 215 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 NBPF5PQ86XG9 351 aaPredicted RBP11.99□□□□□ -0.49
LINC01654-201ENST00000569711 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
LINC01654-201ENST00000569711 CSGALNACT2Q8N6G5 542 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 FAM71BQ8TC56 605 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 P2RX5Q93086 422 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 ERGIC2Q96RQ1 377 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 TTYH3Q9C0H2 523 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 LRRC27Q9C0I9 530 aa11.99□□□□□ -0.49
LINC01654-201ENST00000569711 ESYT2A0FGR8 921 aa11.98□□□□□ -0.49
LINC01654-201ENST00000569711 ERICH4A6NGS2 130 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms