RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ITIH6Q6UXX5 1313 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 PPEF1O14829 653 aaPredicted RBP10.88□□□□□ -0.67
TCF4-240ENST00000568673 CCNT1O60563 726 aaKnown RBP10.88□□□□□ -0.67
TCF4-240ENST00000568673 PRCPP42785 496 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 GABPAQ06546 454 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 KRT31Q15323 416 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 SOGA3Q5TF21 947 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 ANKRD20A12PQ8NF67 263 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 RASSF8Q8NHQ8 419 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 RIOX1Q9H6W3 641 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 ATP6V0A2Q9Y487 856 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 ESYT2A0FGR8 921 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 USP17L5A8MUK1 530 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 H7C1D1 291 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 hCG_1984214I3L0E3 225 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 N4BP3O15049 544 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 FANCGO15287 622 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 COBLO75128 1261 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 PDHBP11177 359 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 TCP11X2Q5H9J9 407 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 NEK8Q86SG6 692 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 ADSSL1Q8N142 457 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 ZNF713Q8N859 430 aaPredicted RBP10.88□□□□□ -0.67
TCF4-240ENST00000568673 PIGSQ96S52 555 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 SRRTQ9BXP5 876 aaKnown RBP10.88□□□□□ -0.67
TCF4-240ENST00000568673 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 MTMR4Q9NYA4 1195 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.88□□□□□ -0.67
TCF4-240ENST00000568673 GDAQ9Y2T3 454 aa10.88□□□□□ -0.67
TCF4-240ENST00000568673 V9GYY5 206 aaPredicted RBP10.88□□□□□ -0.67
TCF4-240ENST00000568673 PLIN4Q96Q06 1357 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 OR52Z1P0C646 297 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 ELF2Q15723 593 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 LETM2Q2VYF4 491 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 CNGA4Q8IV77 575 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 ZNF397Q8NF99 534 aaPredicted RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 CCDC51Q96ER9 411 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 ZC3H12CQ9C0D7 883 aaKnown RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 QTRT2Q9H974 415 aaKnown RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 MAGEF1Q9HAY2 307 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 MAPK8IP1Q9UQF2 711 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 LTBP1Q14766 1721 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 KLRC4O43908 158 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 MFAP3LO75121 409 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 RHOBTB3O94955 611 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 GYPCP04921 128 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 CCDC175P0C221 793 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 CASP14P31944 242 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 CCT6AP40227 531 aaKnown RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 COPB1P53618 953 aaKnown RBP10.87□□□□□ -0.67
TCF4-240ENST00000568673 PICALMQ13492 652 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 KCNJ12Q14500 433 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 CPLX3Q8WVH0 158 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 UBA5Q9GZZ9 404 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 PARP3Q9Y6F1 533 aa10.87□□□□□ -0.67
TCF4-240ENST00000568673 LRRC37AA6NMS7 1700 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 SOWAHDA6NJG2 315 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 URI1O94763 535 aaPredicted RBP10.86□□□□□ -0.67
TCF4-240ENST00000568673 TRIM37O94972 964 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 TPM1P09493 284 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 SNHG28P0DPA3 235 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 GNG11P61952 73 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 TXNRD1Q16881 649 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 ASPRV1Q53RT3 343 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 CABP7Q86V35 215 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
TCF4-240ENST00000568673 PROM2Q8N271 834 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
TCF4-240ENST00000568673 TBCKQ8TEA7 893 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 VPS16Q9H269 839 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 FOCADQ5VW36 1801 aa10.86□□□□□ -0.67
TCF4-240ENST00000568673 IGKV6D-41A0A0C4DH26 115 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 SRGNP10124 158 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 FECHP22830 423 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 CASQ1P31415 396 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 FXR1P51114 621 aaKnown RBP eCLIP10.85□□□□□ -0.67
TCF4-240ENST00000568673 CBX1P83916 185 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 STIM1Q13586 685 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 MTF1Q14872 753 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 IRF2BP1Q8IU81 584 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 CERS5Q8N5B7 392 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 LRRC15Q8TF66 581 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 PLIN2Q99541 437 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 DESI2Q9BSY9 194 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 BIN2Q9UBW5 565 aaPredicted RBP10.85□□□□□ -0.67
TCF4-240ENST00000568673 TTF2Q9UNY4 1162 aaKnown RBP10.85□□□□□ -0.67
TCF4-240ENST00000568673 ADGRG1Q9Y653 693 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 SPDYE4A6NLX3 237 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 F8W031 263 aaPredicted RBP10.85□□□□□ -0.67
TCF4-240ENST00000568673 AKR1B1P15121 316 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 PLCG1P19174 1290 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 TRIM14Q14142 442 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 JAKMIP3Q5VZ66 844 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms