RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	FAM110C	Q1W6H9	321 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	SRBD1	Q8N5C6	995 aa	Known RBP	13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	JMJD4	Q9H9V9	463 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	MORF4L1	Q9UBU8	362 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	COL11A1	P12107	1806 aa	Predicted RBP	13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	hCG_1984214	I3L0E3	225 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	ZBTB5	O15062	677 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	CYTH3	O43739	400 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	ICAM1	P05362	532 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	CCNA1	P78396	465 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	ZNF713	Q8N859	430 aa	Predicted RBP	13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	NECAB1	Q8N987	351 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	REPS2	Q8NFH8	660 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	TEX13B	Q9BXU2	312 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	CPVL	Q9H3G5	476 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	MYH6	P13533	1939 aa		13.9	□□□□□ -0.18
FANCA-231	ENST00000568626	PNMA6F	A0A0J9YX94	578 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	PRPF3	O43395	683 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	DEXI	O95424	95 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	FMNL1	O95466	1100 aa	Predicted RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	ANP32A	P39687	249 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	ERVK-9	P63128	1117 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	ERVK-24	P63145	666 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	HMGN5	P82970	282 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	SSRP1	Q08945	709 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	SLC35G1	Q2M3R5	365 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	QRICH1	Q2TAL8	776 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	NOM1	Q5C9Z4	860 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	NBPF11	Q86T75	865 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	HOMER1	Q86YM7	354 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	CCDC83	Q8IWF9	413 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	CMTR1	Q8N1G2	835 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	NSUN7	Q8NE18	718 aa	Known RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	GPRC5A	Q8NFJ5	357 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	PIGS	Q96S52	555 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	PAGR1	Q9BTK6	254 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	AMN	Q9BXJ7	453 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	VAT1L	Q9HCJ6	419 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	RNF186	Q9NXI6	227 aa		13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	ZNF214	Q9UL59	606 aa	Predicted RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.89	□□□□□ -0.19
FANCA-231	ENST00000568626	PTPDC1	A2A3K4	754 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	SLC25A27	O95847	323 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	BCR	P11274	1271 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	ST3GAL1	Q11201	340 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	CUL4A	Q13619	759 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	TMEM132B	Q14DG7	1078 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	TKFC	Q3LXA3	575 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	SNRNP48	Q6IEG0	339 aa	Known RBP	13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	PPP1R18	Q6NYC8	613 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	C17orf99	Q6UX52	265 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	FAM177A1	Q8N128	213 aa	Predicted RBP	13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	CCDC82	Q8N4S0	544 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	ANKRD13C	Q8N6S4	541 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	SHCBP1	Q8NEM2	672 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	WASF1	Q92558	559 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	INTS4	Q96HW7	963 aa	Known RBP	13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	SLC26A6	Q9BXS9	759 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	SPATC1L	Q9H0A9	340 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	RBPJL	Q9UBG7	517 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	TSKS	Q9UJT2	592 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	CCPG1	Q9ULG6	757 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	KIF3A	Q9Y496	699 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	ZNF536	O15090	1300 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	ABCB11	O95342	1321 aa		13.88	□□□□□ -0.19
FANCA-231	ENST00000568626	TRPA1	O75762	1119 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	CNMD	O75829	334 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	SCG2	P13521	617 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	STAT3	P40763	770 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	PFKFB3	Q16875	520 aa	Predicted RBP	13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	CCDC174	Q6PII3	467 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	FBXO11	Q86XK2	927 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	RIOX2	Q8IUF8	465 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	TEX2	Q8IWB9	1127 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	CPXCR1	Q8N123	301 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	SMARCC2	Q8TAQ2	1214 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	PHKB	Q93100	1093 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	MAF1	Q9H063	256 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	MROH8	Q9H579	483 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	BTBD7	Q9P203	1132 aa		13.87	□□□□□ -0.19
FANCA-231	ENST00000568626		V9GY48	417 aa	Predicted RBP	13.87	□□□□□ -0.19
FANCA-231	ENST00000568626	CTDNEP1	O95476	244 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	PLS1	Q14651	629 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	CHST13	Q8NET6	341 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	CCDC148	Q8NFR7	591 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	RAVER2	Q9HCJ3	691 aa	Known RBP	13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	TXNRD2	Q9NNW7	524 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	ORC3	Q9UBD5	711 aa	Predicted RBP	13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	FBXO40	Q9UH90	709 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	CPA4	Q9UI42	421 aa		13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.86	□□□□□ -0.19
FANCA-231	ENST00000568626	HSP90AA1	P07900	732 aa	Known RBP	13.85	□□□□□ -0.19
FANCA-231	ENST00000568626	XBP1	P17861	261 aa		13.85	□□□□□ -0.19
FANCA-231	ENST00000568626	MAPK4	P31152	587 aa		13.85	□□□□□ -0.19
FANCA-231	ENST00000568626	SNAP25	P60880	206 aa		13.85	□□□□□ -0.19
FANCA-231	ENST00000568626	POTEE	Q6S8J3	1075 aa		13.85	□□□□□ -0.19
FANCA-231	ENST00000568626	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.85	□□□□□ -0.19

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