RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 SOX1O00570 391 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 HAND2P61296 217 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 TKFCQ3LXA3 575 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 DCAF4Q8WV16 495 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 LRCH3Q96II8 777 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 AGBL1Q96MI9 1066 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 TRERF1Q96PN7 1200 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 RNF146Q9NTX7 359 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 TCP11L1Q9NUJ3 509 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
CCNDBP1-213ENST00000568507 COL11A1P12107 1806 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 TOP1P11387 765 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 ALAS1P13196 640 aa17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 ACVR2BQ13705 512 aa17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 PRDM5Q9NQX1 630 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 DIAPH3Q9NSV4 1193 aa17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 PRR12Q9ULL5 1215 aa17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-213ENST00000568507 HIP1O00291 1037 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 PCP11498 1178 aaKnown RBP17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 NOVP48745 357 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 SNAP25P60880 206 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 AKNAD1Q5T1N1 836 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 TMEM47Q9BQJ4 181 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 ABHD16BQ9H3Z7 469 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 SPC25Q9HBM1 224 aa17.64■□□□□ 0.41
CCNDBP1-213ENST00000568507 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 ZNF536O15090 1300 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 ZNF213O14771 459 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 CNTN2Q02246 1040 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 SNX17Q15036 470 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 LRIT3Q3SXY7 679 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 C1orf53Q5VUE5 145 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 ARMCX2Q7L311 632 aa17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 LENG1Q96BZ8 264 aaPredicted RBP17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 TSEN34Q9BSV6 310 aaKnown RBP17.63■□□□□ 0.41
CCNDBP1-213ENST00000568507 DUSP11O75319 330 aaKnown RBP17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 CCDC144CPQ8IYA2 1237 aa17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 ESR2Q92731 530 aa17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 TTC14Q96N46 770 aa17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 GPCPD1Q9NPB8 672 aa17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 A1CFQ9NQ94 594 aaKnown RBP17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 CCPG1Q9ULG6 757 aa17.62■□□□□ 0.41
CCNDBP1-213ENST00000568507 ZNFX1Q9P2E3 1918 aaKnown RBP17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 FRMPD3Q5JV73 1810 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 A0A1W2PQ45 241 aaPredicted RBP17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 A0A1W2PQY0 241 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 ASB14A6NK59 587 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 TLE2Q04725 743 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 CCDC144BQ3MJ40 725 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 SYDE2Q5VT97 1194 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 RASGRP2Q7LDG7 609 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 FAM133AQ8N9E0 248 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 FGD4Q96M96 766 aa17.61■□□□□ 0.41
CCNDBP1-213ENST00000568507 FRMPD2Q68DX3 1309 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 SYNRGQ9UMZ2 1314 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 MOXD2PA6NHM9 499 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 ICAM1P05362 532 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 SLC16A2P36021 539 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 ACLYP53396 1101 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 KCNA10Q16322 511 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 GPR153Q6NV75 609 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 BTNL9Q6UXG8 535 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 KLHDC9Q8NEP7 349 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 RANBP17Q9H2T7 1088 aaKnown RBP17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 STARD7Q9NQZ5 370 aa17.6■□□□□ 0.41
CCNDBP1-213ENST00000568507 DNAH12Q6ZR08 3092 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 SOWAHBA6NEL2 793 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 C6orf222P0C671 652 aaPredicted RBP17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 CCDC178Q5BJE1 867 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 MUM1L1Q5H9M0 696 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 PCSK9Q8NBP7 692 aaKnown RBP17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 VTI1AQ96AJ9 217 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 PDLIM7Q9NR12 457 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 LAMA3Q16787 3333 aa17.59■□□□□ 0.41
CCNDBP1-213ENST00000568507 PQBP1O60828 265 aaKnown RBP17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 CLTBP09497 229 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 PDHBP11177 359 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 NT5C2P49902 561 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 IQCA1Q86XH1 822 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 BADQ92934 168 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 GLT1D1Q96MS3 346 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 ZKSCAN3Q9BRR0 538 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.4
CCNDBP1-213ENST00000568507 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms