RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PSMA7O14818 248 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 PLCG1P19174 1290 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 NBPF5PQ86XG9 351 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 FAM53CQ9NYF3 392 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 LRWD1Q9UFC0 647 aa10.05□□□□□ -0.8
HDGFL3-206ENST00000568294 RCCD1A6NED2 376 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 ARHGAP25P42331 645 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 NPY5RQ15761 445 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNF444Q8N0Y2 327 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 OR8K1Q8NGG5 319 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 TMEM260Q9NX78 707 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 REXO2Q9Y3B8 237 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 AKR1B10O60218 316 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 NTSR2O95665 410 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 SLURP2P0DP57 97 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 HIBADHP31937 336 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 APBA1Q02410 837 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 BRD3Q15059 726 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 GRIK5Q16478 980 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 FAM107BQ9H098 131 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 EHD4Q9H223 541 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 RBM28Q9NW13 759 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
HDGFL3-206ENST00000568294 RNF40O75150 1001 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 MOCS3O95396 460 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 FUT2Q10981 343 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 STK4Q13043 487 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 MB21D1Q8N884 522 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 ZNF512BQ96KM6 892 aaPredicted RBP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 RWDD2AQ9UIY3 292 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 SAR1BQ9Y6B6 198 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 KIF1AQ12756 1690 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 MYBL2P10244 700 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 TXNRD1Q16881 649 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 CCDC181Q5TID7 509 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 SND1Q7KZF4 910 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 CABP7Q86V35 215 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 NELFCDQ8IXH7 590 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 CCDC42Q96M95 316 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 TJP1Q07157 1748 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 KIF5BP33176 963 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 TNNI2P48788 182 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 HERVK_113P62684 666 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 TBC1D9BQ66K14 1250 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 KCTD16Q68DU8 428 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 NSUN4Q96CB9 384 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 GPCPD1Q9NPB8 672 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 TCP11L1Q9NUJ3 509 aa10.03□□□□□ -0.8
HDGFL3-206ENST00000568294 MYO1CO00159 1063 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 SPAG1Q07617 926 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 SPA17Q15506 151 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 SOGA3Q5TF21 947 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 ANKRD40Q6AI12 368 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 RRAGAQ7L523 313 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 LRRC47Q8N1G4 583 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 GLIS3Q8NEA6 775 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 LRRC15Q8TF66 581 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 HDAC7Q8WUI4 952 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 COA7Q96BR5 231 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 RMND1Q9NWS8 449 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 PACSIN2Q9UNF0 486 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 TRPM3Q9HCF6 1732 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 POTEMA6NI47 508 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 E2F4Q16254 413 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 PFKFB3Q16875 520 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 NFRKBQ6P4R8 1299 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 SH3RF1Q7Z6J0 888 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 IFT81Q8WYA0 676 aa10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 RRP36Q96EU6 259 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 CWC15Q9P013 229 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-206ENST00000568294 ERVV-1B6SEH8 477 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 PDE2AO00408 941 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 CALM1P0DP23 149 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 CALM2P0DP24 149 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 CALM3P0DP25 149 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 CACNA2D4Q7Z3S7 1137 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 IRF2BP1Q8IU81 584 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 SPATA20Q8TB22 786 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 MYH15Q9Y2K3 1946 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms