RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 SLC9C2Q5TAH2 1124 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 DZIP1Q86YF9 867 aaKnown RBP9.32□□□□□ -0.92
SMG1-214ENST00000568038 MAGEB6Q8N7X4 407 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMG1-214ENST00000568038 TTF2Q9UNY4 1162 aaKnown RBP9.32□□□□□ -0.92
SMG1-214ENST00000568038 KCNH4Q9UQ05 1017 aa9.32□□□□□ -0.92
SMG1-214ENST00000568038 DICER1Q9UPY3 1922 aaKnown RBP9.32□□□□□ -0.92
SMG1-214ENST00000568038 RNF113AO15541 343 aaKnown RBP9.31□□□□□ -0.92
SMG1-214ENST00000568038 DDNO94850 711 aaPredicted RBP9.31□□□□□ -0.92
SMG1-214ENST00000568038 PDE6AP16499 860 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 CYP7A1P22680 504 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 GMPSP49915 693 aaPredicted RBP9.31□□□□□ -0.92
SMG1-214ENST00000568038 FKBP1AP62942 108 aaKnown RBP9.31□□□□□ -0.92
SMG1-214ENST00000568038 NAA16Q6N069 864 aaPredicted RBP9.31□□□□□ -0.92
SMG1-214ENST00000568038 ZSCAN25Q6NSZ9 544 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 ANKMY2Q8IV38 441 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 AGBL3Q8NEM8 1001 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 GMLQ99445 158 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 MYO5AQ9Y4I1 1855 aaKnown RBP9.31□□□□□ -0.92
SMG1-214ENST00000568038 MYO3BQ8WXR4 1341 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
SMG1-214ENST00000568038 SHTN1A0MZ66 631 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 PROCP04070 461 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 CHMLP26374 656 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 ADD2P35612 726 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 RBM5P52756 815 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMG1-214ENST00000568038 LRRFIP1Q32MZ4 808 aaKnown RBP9.3□□□□□ -0.92
SMG1-214ENST00000568038 GPC2Q8N158 579 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 ZNF384Q8TF68 577 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 NSUN4Q96CB9 384 aaKnown RBP9.3□□□□□ -0.92
SMG1-214ENST00000568038 DIAPH3Q9NSV4 1193 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
SMG1-214ENST00000568038 MAST3O60307 1309 aa9.3□□□□□ -0.92
SMG1-214ENST00000568038 AK9Q5TCS8 1911 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 PSME4Q14997 1843 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 TIAM2Q8IVF5 1701 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 TCRBV5S4A2TA0A5A2 114 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 HIP1O00291 1037 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 SIN3BO75182 1162 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 CDC45O75419 566 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 LDHCP07864 332 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 ZFYP08048 801 aaPredicted RBP9.29□□□□□ -0.92
SMG1-214ENST00000568038 RFX1P22670 979 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
SMG1-214ENST00000568038 GSTO1P78417 241 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 TYRO3Q06418 890 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 NMIQ13287 307 aaPredicted RBP9.29□□□□□ -0.92
SMG1-214ENST00000568038 UBE3CQ15386 1083 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 CWC27Q6UX04 472 aaKnown RBP9.29□□□□□ -0.92
SMG1-214ENST00000568038 ADGRA1Q86SQ6 560 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 ALYREFQ86V81 257 aaKnown RBP9.29□□□□□ -0.92
SMG1-214ENST00000568038 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 APPBP2Q92624 585 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 BHMTQ93088 406 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 OSBP2Q969R2 916 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 IGFLR1Q9H665 355 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 CNOT7Q9UIV1 285 aaKnown RBP9.29□□□□□ -0.92
SMG1-214ENST00000568038 HDAC9Q9UKV0 1011 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 PCDHAC2Q9Y5I4 1007 aa9.29□□□□□ -0.92
SMG1-214ENST00000568038 ZNF646O15015 1829 aaPredicted RBP9.28□□□□□ -0.92
SMG1-214ENST00000568038 A0A0D9SFI3 127 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 GLTPD2A6NH11 291 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 H7C1D1 291 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 EPS15P42566 896 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 CRKP46108 304 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 DYNLL1P63167 89 aaKnown RBP9.28□□□□□ -0.92
SMG1-214ENST00000568038 CFAP100Q494V2 611 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 ZMYM1Q5SVZ6 1142 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 CASC1Q6TDU7 716 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 CCDC129Q6ZRS4 1044 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 BTLAQ7Z6A9 289 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 MIGA1Q8NAN2 632 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 DPF2Q92785 391 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 TEKT1Q969V4 418 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
SMG1-214ENST00000568038 PUS7LQ9H0K6 701 aaKnown RBP9.28□□□□□ -0.92
SMG1-214ENST00000568038 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 DAGLAQ9Y4D2 1042 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 DOCK2Q92608 1830 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 MROH7-TTC4A0A0A0MT08 1334 aa9.28□□□□□ -0.92
SMG1-214ENST00000568038 RFX7Q2KHR2 1363 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 M0R2C6 588 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 IGSF3O75054 1194 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 MBD4O95243 580 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 BTDP43251 543 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 HDLBPQ00341 1268 aaKnown RBP9.27□□□□□ -0.93
SMG1-214ENST00000568038 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 HHIPL2Q6UWX4 724 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 RUFY2Q8WXA3 655 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 NOL10Q9BSC4 688 aaKnown RBP9.27□□□□□ -0.93
SMG1-214ENST00000568038 MRIQ9BWK5 157 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms