RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 IFNGR1P15260 489 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 EEPD1Q7L9B9 569 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 ZNF227Q86WZ6 799 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 TMEM59LQ9UK28 342 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 AKT3Q9Y243 479 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 SF3B6Q9Y3B4 125 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 A0A1W2PQU0 124 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 GDNFP39905 211 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 ERVFC1P60507 584 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 GRB10Q13322 594 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 SV2CQ496J9 727 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 TRIM59Q8IWR1 403 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 ST13P5Q8NFI4 369 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 LNPKQ9C0E8 428 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 EPN3Q9H201 632 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 RC3H2Q9HBD1 1191 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 AP5S1Q9NUS5 200 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 ERVK13-1Q9NX77 482 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 SNTG2Q9NY99 539 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 SUGT1Q9Y2Z0 365 aa6.06□□□□□ -1.44
HERPUD1-212ENST00000567944 AURKAO14965 403 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 PDPK1O15530 556 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 CD3EP07766 207 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 RPL10P27635 214 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 GRIA2P42262 883 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 HK2P52789 917 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 RASGRF1Q13972 1273 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 SOGA3Q5TF21 947 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 LRP10Q7Z4F1 713 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 WAPLQ7Z5K2 1190 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 FLAD1Q8NFF5 587 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 MKL1Q969V6 931 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 HHIPL1Q96JK4 782 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 KRTAP4-2Q9BYR5 136 aa6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 GPR55Q9Y2T6 319 aaPredicted RBP6.05□□□□□ -1.44
HERPUD1-212ENST00000567944 CCDC85CA6NKD9 419 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 ARNTLO00327 626 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 U2SURPO15042 1029 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 FGF10O15520 208 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 KCNH1O95259 989 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 HPXP02790 462 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 GSTM1P09488 218 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 NAT2P11245 290 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 ITGB5P18084 799 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 POU4F1Q01851 419 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 SF1Q15637 639 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 DPY19L1Q2PZI1 675 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 TIGD5Q53EQ6 642 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 FYB2Q5VWT5 728 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 CWF19L1Q69YN2 538 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 GTF2IRD2BQ6EKJ0 949 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 GTF2IRD2Q86UP8 949 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 BTN2A2Q8WVV5 523 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 COPS5Q92905 334 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 MAP6Q96JE9 813 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 DEPDC7Q96QD5 511 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 OSBPL2Q9H1P3 480 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
HERPUD1-212ENST00000567944 FADS2P1A8MWK0 482 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 STXBP3O00186 592 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 ADCY3O60266 1144 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 DIAPH1O60610 1272 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 PAPLNO95428 1278 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 TRHRP34981 398 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 PPP2R2AP63151 447 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 AMPD2Q01433 879 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 CCDC144BQ3MJ40 725 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 RCSD1Q6JBY9 416 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 ATG4DQ86TL0 474 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 ZNF669Q96BR6 464 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 CDADC1Q9BWV3 514 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 NKX2-4Q9H2Z4 354 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 PIF1Q9H611 641 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 ARHGEF4Q9NR80 690 aa6.03□□□□□ -1.44
HERPUD1-212ENST00000567944 SSU72P8A0A1W2PR75 194 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 NOP56O00567 594 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 IGSF3O75054 1194 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 USP2O75604 605 aaPredicted RBP6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 RANGAP1P46060 587 aaPredicted RBP6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 NOP2P46087 812 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 NR0B2Q15466 257 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 DENND5AQ6IQ26 1287 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 POMZP3Q6PJE2 187 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 DPH6Q7L8W6 267 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 PDZD8Q8NEN9 1154 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 PPP1R14AQ96A00 147 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 SHISA4Q96DD7 197 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 C1orf159Q96HA4 380 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 SGSM3Q96HU1 749 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 C19orf44Q9H6X5 657 aa6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 CDK11AQ9UQ88 783 aaPredicted RBP6.02□□□□□ -1.45
HERPUD1-212ENST00000567944 CARMIL2Q6F5E8 1435 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 C2orf71A6NGG8 1288 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 SCG5P05408 212 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 SCRN1Q12765 414 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 YOD1Q5VVQ6 348 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms