RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ZNF214Q9UL59 606 aaPredicted RBP16.73■□□□□ 0.27
SMG1-213ENST00000567737 DCXO43602 365 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 B4GALT4O60513 344 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 IDH1O75874 414 aaKnown RBP16.72■□□□□ 0.27
SMG1-213ENST00000567737 BEX3Q00994 111 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 ICA1Q05084 483 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 MTX1Q13505 466 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 MAGEB6Q8N7X4 407 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 TRPV6Q9H1D0 765 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 UBE2ZQ9H832 354 aaPredicted RBP16.72■□□□□ 0.27
SMG1-213ENST00000567737 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 LMCD1Q9NZU5 365 aa16.72■□□□□ 0.27
SMG1-213ENST00000567737 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
SMG1-213ENST00000567737 CTAGE5O15320 804 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 ST18O60284 1047 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 NKX3-2P78367 333 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 LEXMQ3ZCV2 418 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 NOL8Q76FK4 1167 aaKnown RBP16.71■□□□□ 0.27
SMG1-213ENST00000567737 DEFB128Q7Z7B8 93 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 ZNF579Q8NAF0 562 aaKnown RBP16.71■□□□□ 0.27
SMG1-213ENST00000567737 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 SMC4Q9NTJ3 1288 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 FBXO28Q9NVF7 368 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
SMG1-213ENST00000567737 ZNF536O15090 1300 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 DNAJC25-GNG10A0A024R161 153 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 LPXNO60711 386 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 IL9P15248 144 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 CLEC10AQ8IUN9 316 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 VWCEQ96DN2 955 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 ZNF512BQ96KM6 892 aaPredicted RBP16.7■□□□□ 0.26
SMG1-213ENST00000567737 DBNDD2Q9BQY9 259 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 TEX13BQ9BXU2 312 aa16.7■□□□□ 0.26
SMG1-213ENST00000567737 COL11A1P12107 1806 aaPredicted RBP16.7■□□□□ 0.26
SMG1-213ENST00000567737 PARP14Q460N5 1801 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 ZEB2O60315 1214 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 GNAI3P08754 354 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 KCNA5P22460 613 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 FOXK2Q01167 660 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
SMG1-213ENST00000567737 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 REPS2Q8NFH8 660 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.69■□□□□ 0.26
SMG1-213ENST00000567737 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 MCM9Q9NXL9 1143 aa16.69■□□□□ 0.26
SMG1-213ENST00000567737 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.68■□□□□ 0.26
SMG1-213ENST00000567737 RAD21O60216 631 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
SMG1-213ENST00000567737 GDPD5Q8WTR4 605 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
SMG1-213ENST00000567737 GPR108Q9NPR9 543 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
SMG1-213ENST00000567737 SUPT20HL2P0C7V6 817 aa16.67■□□□□ 0.26
SMG1-213ENST00000567737 SLC4A3P48751 1232 aa16.67■□□□□ 0.26
SMG1-213ENST00000567737 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
SMG1-213ENST00000567737 PUS10Q3MIT2 529 aaKnown RBP16.67■□□□□ 0.26
SMG1-213ENST00000567737 TMED8Q6PL24 325 aaPredicted RBP16.67■□□□□ 0.26
SMG1-213ENST00000567737 TLK2Q86UE8 772 aa16.67■□□□□ 0.26
SMG1-213ENST00000567737 MFSD14AQ96MC6 490 aa16.67■□□□□ 0.26
SMG1-213ENST00000567737 GOPCQ9HD26 462 aa16.67■□□□□ 0.26
SMG1-213ENST00000567737 MYO5AQ9Y4I1 1855 aaKnown RBP16.67■□□□□ 0.26
SMG1-213ENST00000567737 COL4A4P53420 1690 aaPredicted RBP16.66■□□□□ 0.26
SMG1-213ENST00000567737 WDFY4Q6ZS81 3184 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 AKR1B1P15121 316 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 RFC2P35250 354 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 PSMC6P62333 389 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 EVX2Q03828 476 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 ANKRD35Q8N283 1001 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 PHOX2BQ99453 314 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
SMG1-213ENST00000567737 AP5M1Q9H0R1 490 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
SMG1-213ENST00000567737 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
SMG1-213ENST00000567737 RIPK3Q9Y572 518 aa16.66■□□□□ 0.26
SMG1-213ENST00000567737 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.65■□□□□ 0.26
SMG1-213ENST00000567737 CYP2C9P11712 490 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 FAM83BQ5T0W9 1011 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 HFE2Q6ZVN8 426 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 SPRED2Q7Z698 418 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 CCDC144CPQ8IYA2 1237 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 PHF12Q96QT6 1004 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 RIOK1Q9BRS2 568 aaKnown RBP16.65■□□□□ 0.26
SMG1-213ENST00000567737 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMG1-213ENST00000567737 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
SMG1-213ENST00000567737 ASTN1O14525 1302 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
SMG1-213ENST00000567737 GRXCR2A6NFK2 248 aa16.64■□□□□ 0.25
SMG1-213ENST00000567737 EEF2P13639 858 aaKnown RBP16.64■□□□□ 0.25
SMG1-213ENST00000567737 KCNJ6P48051 423 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms