RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 TMEM47Q9BQJ4 181 aa8.15□□□□□ -1.1
SF3B3-209ENST00000567635 TINF2Q9BSI4 451 aa8.15□□□□□ -1.1
SF3B3-209ENST00000567635 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
SF3B3-209ENST00000567635 MTMR7Q9Y216 660 aa8.15□□□□□ -1.1
SF3B3-209ENST00000567635 PFASO15067 1338 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 DNM1LO00429 736 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 SNAP25P60880 206 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 IMMTQ16891 758 aaKnown RBP8.14□□□□□ -1.11
SF3B3-209ENST00000567635 CCDC96Q2M329 555 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 GJC2Q5T442 439 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-209ENST00000567635 TTBK2Q6IQ55 1244 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 MAMDC4Q6UXC1 1216 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 BTNL9Q6UXG8 535 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 CHRDL2Q6WN34 429 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
SF3B3-209ENST00000567635 ZNF467Q7Z7K2 595 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-209ENST00000567635 TBC1D10CQ8IV04 446 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 C7orf61Q8IZ16 206 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 AGBL1Q96MI9 1066 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 SENP6Q9GZR1 1112 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-209ENST00000567635 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 HOMER2Q9NSB8 354 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 ZSWIM5Q9P217 1185 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 PRR12Q9ULL5 1215 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 CNPY2Q9Y2B0 182 aa8.14□□□□□ -1.11
SF3B3-209ENST00000567635 ZNF536O15090 1300 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 SYNGAP1Q96PV0 1343 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 KBTBD13C9JR72 458 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 KDM4AO75164 1064 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 RARBP10826 455 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 ALAS1P13196 640 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 GSPT1P15170 499 aaKnown RBP8.13□□□□□ -1.11
SF3B3-209ENST00000567635 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
SF3B3-209ENST00000567635 CHMLP26374 656 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 SLC16A2P36021 539 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 CNTN2Q02246 1040 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 LRRC41Q15345 812 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 LRRC26Q2I0M4 334 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 ANO1Q5XXA6 986 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 CCDC174Q6PII3 467 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 IQCA1Q86XH1 822 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 DGKHQ86XP1 1220 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 KRT23Q9C075 422 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 ACAD9Q9H845 621 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 CNNM2Q9H8M5 875 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 RNF146Q9NTX7 359 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
SF3B3-209ENST00000567635 FAM184BQ9ULE4 1060 aa8.13□□□□□ -1.11
SF3B3-209ENST00000567635 MYO9BQ13459 2157 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 NEDD4P46934 1319 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 FRMPD2Q68DX3 1309 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-209ENST00000567635 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 B4E1Z4 1266 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 POTEB2H3BUK9 544 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 SNAI1O95863 264 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ICAM1P05362 532 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ZNF865P0CJ78 1059 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-209ENST00000567635 PDHBP11177 359 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ZNF543Q08ER8 600 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ACVR2BQ13705 512 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 SYDE2Q5VT97 1194 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 RASGRP2Q7LDG7 609 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ANKS1AQ92625 1134 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ZSCAN10Q96SZ4 725 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ABHD16BQ9H3Z7 469 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 KAT14Q9H8E8 782 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 PNMA2Q9UL42 364 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 CCPG1Q9ULG6 757 aa8.12□□□□□ -1.11
SF3B3-209ENST00000567635 ZMYND8Q9ULU4 1186 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-209ENST00000567635 LCTP09848 1927 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 RAD50Q92878 1312 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 ASB14A6NK59 587 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 PGK1P00558 417 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 SNHG28P0DPA3 235 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 AKR1A1P14550 325 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 SYN1P17600 705 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-209ENST00000567635 PTH1RQ03431 593 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 MUM1L1Q5H9M0 696 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 GPATCH4Q5T3I0 446 aaKnown RBP8.11□□□□□ -1.11
SF3B3-209ENST00000567635 SLC39A5Q6ZMH5 540 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 ARMCX2Q7L311 632 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 RNF180Q86T96 592 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 CCDC144CPQ8IYA2 1237 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 ENAHQ8N8S7 591 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-209ENST00000567635 FAM133AQ8N9E0 248 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 FERMT2Q96AC1 680 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 FGD4Q96M96 766 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 UBAC1Q9BSL1 405 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 IL25Q9H293 177 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 RANBP17Q9H2T7 1088 aaKnown RBP8.11□□□□□ -1.11
SF3B3-209ENST00000567635 PRO3102Q9H379 93 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 A1CFQ9NQ94 594 aaKnown RBP8.11□□□□□ -1.11
SF3B3-209ENST00000567635 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-209ENST00000567635 CYP39A1Q9NYL5 469 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms