RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 DNM3Q9UQ16 869 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 V9GY48 417 aaPredicted RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 RGS16O15492 202 aaPredicted RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CEP104O60308 925 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GMNNO75496 209 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF853P0CG23 659 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PHBP35232 272 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 STAT1P42224 750 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 RCAN1P53805 252 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 EZH2Q15910 746 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 LETM2Q2VYF4 491 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 KRT71Q3SY84 523 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PIK3AP1Q6ZUJ8 805 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CABP7Q86V35 215 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GAS2L3Q86XJ1 694 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 TEKT1Q969V4 418 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 SUCLG2Q96I99 432 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 MAK16Q9BXY0 300 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GPBP1L1Q9HC44 474 aaPredicted RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 RIC8AQ9NPQ8 531 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 DDX41Q9UJV9 622 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PCDHA7Q9UN72 937 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GOLGA8QA0A0J9YX86 632 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GOLGA8OA6NCC3 632 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 GOLGA8NF8WBI6 632 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 I3L4J1 428 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CLGNO14967 610 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 NR1I2O75469 434 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 EIF3BP55884 814 aaKnown RBP4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ARID5AQ03989 594 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 MORC3Q14149 939 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC93Q567U6 631 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 HHATQ5VTY9 493 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 ANKRD20A3Q5VUR7 823 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 PPP4R3CPQ6ZMV5 832 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CDAN1Q8IWY9 1227 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 RGS22Q8NE09 1264 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 CCHCR1Q8TD31 782 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 SLF1Q9BQI6 1058 aa4.8□□□□□ -1.64
LPCAT2-208ENST00000566915 NEURL1BA8MQ27 555 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 THAP12O43422 761 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 YY1P25490 414 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 HPDP32754 393 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CTNNA1P35221 906 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 GNGT1P63211 74 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 BEND3Q5T5X7 828 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 MYOCDQ8IZQ8 938 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC63Q8NA47 563 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 ATP2A3Q93084 1043 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 PPP1R13BQ96KQ4 1090 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 FNBP1Q96RU3 617 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 Q9H521 79 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 HAUS2Q9NVX0 235 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TAB2Q9NYJ8 693 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TPCN1Q9ULQ1 816 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CASQ2O14958 399 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 ZBTB7AO95365 584 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CPA1P15085 419 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 ITGA6P23229 1130 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 HIBADHP31937 336 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SLC39A6Q13433 755 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 EMBQ6PCB8 327 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CHST3Q7LGC8 479 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TRIM42Q8IWZ5 723 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SLFN12Q8IYM2 578 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF654Q8IZM8 581 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 REXO1Q8N1G1 1221 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 GBP7Q8N8V2 638 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 BCAS4Q8TDM0 211 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 WHAMMQ8TF30 809 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 FAM204AQ9H8W3 233 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 THEGQ9P2T0 379 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SERTAD1Q9UHV2 236 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CD2APQ9Y5K6 639 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 ATP10DQ9P241 1426 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 QRICH2Q9H0J4 1663 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 E7EVH7 732 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 IL6STP40189 918 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SLC8A3P57103 927 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CALCRLQ16602 461 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 KRT24Q2M2I5 525 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 HSP90AA5PQ58FG0 334 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 DCAF17Q5H9S7 520 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SPATA5Q8NB90 893 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 FANCBQ8NB91 859 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SNX29Q8TEQ0 813 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TRIM11Q96F44 468 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 ZC3H12CQ9C0D7 883 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CTTNBP2NLQ9P2B4 639 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 DIS3Q9Y2L1 958 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 PCDHB13Q9Y5F0 798 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 COMMD10Q9Y6G5 202 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 COL14A1Q05707 1796 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TAF5LO75529 589 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 H2AFZP0C0S5 128 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 XRCC5P13010 732 aaKnown RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 IBSPP21815 317 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TCIRG1Q13488 830 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms