RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
LSM3P5-201ENST00000566307 ZBTB21Q9ULJ3 1066 aa10.13□□□□□ -0.79
LSM3P5-201ENST00000566307 PCDHA6Q9UN73 950 aa10.13□□□□□ -0.79
LSM3P5-201ENST00000566307 PCDHA8Q9Y5H6 950 aa10.13□□□□□ -0.79
LSM3P5-201ENST00000566307 PPP2R3BQ9Y5P8 575 aa10.13□□□□□ -0.79
LSM3P5-201ENST00000566307 SBF1O95248 1867 aa10.13□□□□□ -0.79
LSM3P5-201ENST00000566307 CCDC194A0A1B0GVG4 234 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 ZNF202O95125 648 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 ASNSP08243 561 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 SLC1A4P43007 532 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 NDUFA8P51970 172 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 NAPAP54920 295 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 RASSF7Q02833 373 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 RRP1BQ14684 758 aaKnown RBP10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 NBPF9Q3BBW0 867 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 CLEC10AQ8IUN9 316 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 APOBEC3FQ8IUX4 373 aaKnown RBP10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 ADGRF4Q8IZF3 695 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 FAM200AQ8TCP9 573 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 PPP1R9BQ96SB3 815 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 VEZTQ9HBM0 779 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 RIC8AQ9NPQ8 531 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 CNOT7Q9UIV1 285 aaKnown RBP10.12□□□□□ -0.79
LSM3P5-201ENST00000566307 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 A0A1B0GVL5 298 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 SMCO2A6NFE2 343 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 FAM196BA6NMK8 535 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 PHF20L1A8MW92 1017 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 F5H6K3 240 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 H7C1D1 291 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 GDF11O95390 407 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 NDUFB10O96000 172 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 MARCKSP29966 332 aaPredicted RBP10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 SYKP43405 635 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 TYRO3Q06418 890 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 KLRC3Q07444 240 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 CCDC173Q0VFZ6 552 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 RASA3Q14644 834 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 NONOQ15233 471 aaKnown RBP eCLIP10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 CCDC96Q2M329 555 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 KIF4BQ2VIQ3 1234 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 KANK3Q6NY19 840 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 PIK3AP1Q6ZUJ8 805 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 RASGRP2Q7LDG7 609 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 C4orf32Q8N8J7 132 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 ANP32BQ92688 251 aaKnown RBP10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 PDLIM2Q96JY6 352 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 NAP1L4Q99733 375 aaKnown RBP10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 TMEM39BQ9GZU3 492 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 UBA5Q9GZZ9 404 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 GPRC5DQ9NZD1 345 aa10.11□□□□□ -0.79
LSM3P5-201ENST00000566307 FRMPD2Q68DX3 1309 aaPredicted RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 ZNF541Q9H0D2 1346 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 ZC3H4Q9UPT8 1303 aaKnown RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 CTNND1O60716 968 aaKnown RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 BMP3P12645 472 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 LONP1P36776 959 aaKnown RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 PSEN1P49768 467 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 ADCY7P51828 1080 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 MRPL12P52815 198 aaKnown RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 JAG1P78504 1218 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 DCAF15Q66K64 600 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 SASS6Q6UVJ0 657 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 KRBA2Q6ZNG9 492 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 FAM160B2Q86V87 743 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 REXO1Q8N1G1 1221 aaKnown RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 CCDC34Q96HJ3 373 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 VCPKMTQ9H867 229 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 ANO10Q9NW15 660 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 KIAA1468Q9P260 1216 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 HOOK1Q9UJC3 728 aaKnown RBP10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 TUBE1Q9UJT0 475 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 ZNF112Q9UJU3 913 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 MRVI1Q9Y6F6 885 aa10.1□□□□□ -0.79
LSM3P5-201ENST00000566307 A0A1W2PRG0 241 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 SLURP2P0DP57 97 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 PTGDRQ13258 359 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 AP3B2Q13367 1082 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 CDC37Q16543 378 aaPredicted RBP10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 STX1AQ16623 288 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 QRICH1Q2TAL8 776 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 SYDE2Q5VT97 1194 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 TTBK2Q6IQ55 1244 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 MOXD1Q6UVY6 613 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 NEK8Q86SG6 692 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 HOMER1Q86YM7 354 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 LPAR1Q92633 364 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 CUL5Q93034 780 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms