RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
UBFD1-205ENST00000566136 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 GPR152Q8TDT2 470 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
UBFD1-205ENST00000566136 IFIT1P09914 478 aaKnown RBP12.35□□□□□ -0.43
UBFD1-205ENST00000566136 STAT4Q14765 748 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 WDR45BQ5MNZ6 344 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 RIN3Q8TB24 985 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBFD1-205ENST00000566136 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 TBC1D31Q96DN5 1066 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 CARD10Q9BWT7 1032 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 YOD1Q5VVQ6 348 aaPredicted RBP12.35□□□□□ -0.43
UBFD1-205ENST00000566136 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
UBFD1-205ENST00000566136 CCDC74AQ96AQ1 378 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 CRB3Q9BUF7 120 aa12.35□□□□□ -0.43
UBFD1-205ENST00000566136 IGSF1Q8N6C5 1336 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 TRIM64CA6NLI5 447 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 PF4V1P10720 104 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 SEZ6Q53EL9 994 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 ZC3H12AQ5D1E8 599 aaKnown RBP12.34□□□□□ -0.43
UBFD1-205ENST00000566136 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 MARCH10Q8NA82 808 aaPredicted RBP12.34□□□□□ -0.43
UBFD1-205ENST00000566136 GOLM1Q8NBJ4 401 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 NAA15Q9BXJ9 866 aaKnown RBP12.34□□□□□ -0.43
UBFD1-205ENST00000566136 PCDHB11Q9Y5F2 797 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 HOXC9P31274 260 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 IARSP41252 1262 aaKnown RBP12.34□□□□□ -0.43
UBFD1-205ENST00000566136 BARD1Q99728 777 aaKnown RBP12.34□□□□□ -0.43
UBFD1-205ENST00000566136 APOL5Q9BWW9 433 aa12.34□□□□□ -0.43
UBFD1-205ENST00000566136 KDRP35968 1356 aa12.33□□□□□ -0.43
UBFD1-205ENST00000566136 CD4P01730 458 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 NRLP54845 237 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 CCDC85BQ15834 202 aaPredicted RBP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 HEATR6Q6AI08 1181 aaKnown RBP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 GJA10Q969M2 543 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 FAM8A1Q9UBU6 413 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 FEZ2Q9UHY8 353 aaPredicted RBP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 RABL2BQ9UNT1 228 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 CAPN3P20807 821 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 PCBP1Q15365 356 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 ELF2Q15723 593 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 SEPT7Q16181 437 aaKnown RBP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 INTS3Q68E01 1043 aaKnown RBP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 G2E3Q7L622 706 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 SUCOQ9UBS9 1254 aaKnown RBP12.33□□□□□ -0.44
UBFD1-205ENST00000566136 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
UBFD1-205ENST00000566136 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
UBFD1-205ENST00000566136 ZAP70P43403 619 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 MZT2AQ6P582 158 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 PKN3Q6P5Z2 889 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 XPO4Q9C0E2 1151 aaKnown RBP12.32□□□□□ -0.44
UBFD1-205ENST00000566136 LTN1O94822 1766 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 ABHD14A-ACY1A0A1B0GW23 586 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 CHKAP35790 457 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
UBFD1-205ENST00000566136 MEIS3Q99687 375 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 SMOC1Q9H4F8 434 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 FBXO10Q9UK96 956 aa12.32□□□□□ -0.44
UBFD1-205ENST00000566136 A6NNZ2 444 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 PLA2G4AP47712 749 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 BMP2KLQ5H9B9 411 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 RNF20Q5VTR2 975 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 FAM47EQ6ZV65 393 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 SYDE1Q6ZW31 735 aaPredicted RBP12.31□□□□□ -0.44
UBFD1-205ENST00000566136 ARL10Q8N8L6 244 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 BCO2Q9BYV7 579 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 USP20Q9Y2K6 914 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 USP3Q9Y6I4 520 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 TRIM6-TRIM34B2RNG4 842 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 TOR1BO14657 336 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 HLTFQ14527 1009 aaKnown RBP eCLIP12.31□□□□□ -0.44
UBFD1-205ENST00000566136 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 SLC6A19Q695T7 634 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 NKAPQ8N5F7 415 aaKnown RBP12.31□□□□□ -0.44
UBFD1-205ENST00000566136 ABCC6O95255 1503 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
UBFD1-205ENST00000566136 J3KRW8 73 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 ADCY3O60266 1144 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms