RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 MAMDC4Q6UXC1 1216 aa23.48■■□□□ 1.35
TRADD-204ENST00000566104 CTNNA3Q9UI47 895 aa23.48■■□□□ 1.35
TRADD-204ENST00000566104 PRR12Q9ULL5 1215 aa23.48■■□□□ 1.35
TRADD-204ENST00000566104 ZMYND8Q9ULU4 1186 aaPredicted RBP23.48■■□□□ 1.35
TRADD-204ENST00000566104 IMMTQ16891 758 aaKnown RBP23.47■■□□□ 1.35
TRADD-204ENST00000566104 GJC2Q5T442 439 aaPredicted RBP23.47■■□□□ 1.35
TRADD-204ENST00000566104 CHMP4CQ96CF2 233 aa23.47■■□□□ 1.35
TRADD-204ENST00000566104 TMEM47Q9BQJ4 181 aa23.47■■□□□ 1.35
TRADD-204ENST00000566104 XPNPEP3Q9NQH7 507 aa23.47■■□□□ 1.35
TRADD-204ENST00000566104 RNF146Q9NTX7 359 aa23.47■■□□□ 1.35
TRADD-204ENST00000566104 ZNF536O15090 1300 aa23.46■■□□□ 1.35
TRADD-204ENST00000566104 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
TRADD-204ENST00000566104 PDE4AP27815 886 aa23.46■■□□□ 1.35
TRADD-204ENST00000566104 NEDD4P46934 1319 aa23.46■■□□□ 1.35
TRADD-204ENST00000566104 CCDC178Q5BJE1 867 aa23.46■■□□□ 1.35
TRADD-204ENST00000566104 IQCA1Q86XH1 822 aa23.46■■□□□ 1.35
TRADD-204ENST00000566104 RAD50Q92878 1312 aa23.46■■□□□ 1.35
TRADD-204ENST00000566104 ZNF865P0CJ78 1059 aaPredicted RBP23.45■■□□□ 1.34
TRADD-204ENST00000566104 ALAS1P13196 640 aa23.45■■□□□ 1.34
TRADD-204ENST00000566104 LRRC41Q15345 812 aa23.45■■□□□ 1.34
TRADD-204ENST00000566104 CCDC174Q6PII3 467 aa23.45■■□□□ 1.34
TRADD-204ENST00000566104 RASGRP2Q7LDG7 609 aa23.45■■□□□ 1.34
TRADD-204ENST00000566104 RNF180Q86T96 592 aa23.45■■□□□ 1.34
TRADD-204ENST00000566104 AGBL1Q96MI9 1066 aa23.45■■□□□ 1.34
TRADD-204ENST00000566104 PDHBP11177 359 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 SYN1P17600 705 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 BMP8BP34820 402 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 BTNL9Q6UXG8 535 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 RUFY2Q8WXA3 655 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 TRERF1Q96PN7 1200 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 GDF15Q99988 308 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 RANBP17Q9H2T7 1088 aaKnown RBP23.44■■□□□ 1.34
TRADD-204ENST00000566104 ZHX1Q9UKY1 873 aaPredicted RBP23.44■■□□□ 1.34
TRADD-204ENST00000566104 PNMA2Q9UL42 364 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 FAM184BQ9ULE4 1060 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 CCPG1Q9ULG6 757 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 LRRC37A2A6NM11 1700 aa23.44■■□□□ 1.34
TRADD-204ENST00000566104 RANBP2P49792 3224 aaKnown RBP23.43■■□□□ 1.34
TRADD-204ENST00000566104 POTEB2H3BUK9 544 aa23.43■■□□□ 1.34
TRADD-204ENST00000566104 ICAM1P05362 532 aa23.43■■□□□ 1.34
TRADD-204ENST00000566104 GSPT1P15170 499 aaKnown RBP23.43■■□□□ 1.34
TRADD-204ENST00000566104 TAL1P17542 331 aaPredicted RBP23.43■■□□□ 1.34
TRADD-204ENST00000566104 ATN1P54259 1190 aaPredicted RBP23.43■■□□□ 1.34
TRADD-204ENST00000566104 SYDE2Q5VT97 1194 aa23.43■■□□□ 1.34
TRADD-204ENST00000566104 DGKHQ86XP1 1220 aa23.43■■□□□ 1.34
TRADD-204ENST00000566104 ABHD16BQ9H3Z7 469 aa23.43■■□□□ 1.34
TRADD-204ENST00000566104 A1CFQ9NQ94 594 aaKnown RBP23.43■■□□□ 1.34
TRADD-204ENST00000566104 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.43■■□□□ 1.34
TRADD-204ENST00000566104 MYH6P13533 1939 aa23.43■■□□□ 1.34
TRADD-204ENST00000566104 DNAH12Q6ZR08 3092 aa23.42■■□□□ 1.34
TRADD-204ENST00000566104 FRMPD2Q68DX3 1309 aaPredicted RBP23.42■■□□□ 1.34
TRADD-204ENST00000566104 LCTP09848 1927 aa23.42■■□□□ 1.34
TRADD-204ENST00000566104 SNAI1O95863 264 aaPredicted RBP23.42■■□□□ 1.34
TRADD-204ENST00000566104 KRT23Q9C075 422 aa23.42■■□□□ 1.34
TRADD-204ENST00000566104 CNNM2Q9H8M5 875 aa23.42■■□□□ 1.34
TRADD-204ENST00000566104 LTBP2Q14767 1821 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 KDM4AO75164 1064 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 SLC16A2P36021 539 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 MAGEA10P43363 369 aaPredicted RBP23.41■■□□□ 1.34
TRADD-204ENST00000566104 RTP1P59025 263 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 ZNF543Q08ER8 600 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 ACVR2BQ13705 512 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 GPATCH4Q5T3I0 446 aaKnown RBP23.41■■□□□ 1.34
TRADD-204ENST00000566104 ARMCX2Q7L311 632 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 FAM133AQ8N9E0 248 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 FGD4Q96M96 766 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 GPCPD1Q9NPB8 672 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 PCDH10Q9P2E7 1040 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 PRKAG2Q9UGJ0 569 aa23.41■■□□□ 1.34
TRADD-204ENST00000566104 ASB14A6NK59 587 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 PGK1P00558 417 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 SNHG28P0DPA3 235 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 ADCYAP1R1P41586 468 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 TTBK2Q6IQ55 1244 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 SLC39A5Q6ZMH5 540 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 ZKSCAN3Q9BRR0 538 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 PHF24Q9UPV7 400 aa23.4■■□□□ 1.34
TRADD-204ENST00000566104 B4E1Z4 1266 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 DUSP11O75319 330 aaKnown RBP23.39■■□□□ 1.33
TRADD-204ENST00000566104 SNAP25P60880 206 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 CNTN2Q02246 1040 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 SNX17Q15036 470 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 C1orf53Q5VUE5 145 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 CCDC144CPQ8IYA2 1237 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 TSEN34Q9BSV6 310 aaKnown RBP23.39■■□□□ 1.33
TRADD-204ENST00000566104 KAT14Q9H8E8 782 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 ATP11BQ9Y2G3 1177 aa23.39■■□□□ 1.33
TRADD-204ENST00000566104 SYNRGQ9UMZ2 1314 aa23.38■■□□□ 1.33
TRADD-204ENST00000566104 MUM1L1Q5H9M0 696 aa23.38■■□□□ 1.33
TRADD-204ENST00000566104 PNMA1Q8ND90 353 aa23.38■■□□□ 1.33
TRADD-204ENST00000566104 ZSCAN10Q96SZ4 725 aaPredicted RBP23.38■■□□□ 1.33
TRADD-204ENST00000566104 SPC25Q9HBM1 224 aa23.38■■□□□ 1.33
TRADD-204ENST00000566104 CYP39A1Q9NYL5 469 aa23.38■■□□□ 1.33
TRADD-204ENST00000566104 ADAMTS4O75173 837 aa23.37■■□□□ 1.33
TRADD-204ENST00000566104 NSMFQ6X4W1 530 aa23.37■■□□□ 1.33
TRADD-204ENST00000566104 FERMT2Q96AC1 680 aa23.37■■□□□ 1.33
TRADD-204ENST00000566104 LENG1Q96BZ8 264 aaPredicted RBP23.37■■□□□ 1.33
TRADD-204ENST00000566104 LBHD1Q9BQE6 289 aaPredicted RBP23.37■■□□□ 1.33
TRADD-204ENST00000566104 UBAC1Q9BSL1 405 aa23.37■■□□□ 1.33
TRADD-204ENST00000566104 UBE2OQ9C0C9 1292 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms