RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 IFNAR1P17181 557 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 TMEM132BQ14DG7 1078 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 GPRC5AQ8NFJ5 357 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 KIFC2Q96AC6 838 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 ZNF214Q9UL59 606 aaPredicted RBP14.64□□□□□ -0.07
SF3B3-206ENST00000565990 ZNFX1Q9P2E3 1918 aaKnown RBP14.63□□□□□ -0.07
SF3B3-206ENST00000565990 DHX16O60231 1041 aaKnown RBP14.63□□□□□ -0.07
SF3B3-206ENST00000565990 TBC1D8O95759 1140 aa14.63□□□□□ -0.07
SF3B3-206ENST00000565990 CMTR1Q8N1G2 835 aaKnown RBP14.63□□□□□ -0.07
SF3B3-206ENST00000565990 ANKRD13CQ8N6S4 541 aa14.63□□□□□ -0.07
SF3B3-206ENST00000565990 SMCR8Q8TEV9 937 aaPredicted RBP14.63□□□□□ -0.07
SF3B3-206ENST00000565990 GTF3C6Q969F1 213 aa14.63□□□□□ -0.07
SF3B3-206ENST00000565990 NCOA5Q9HCD5 579 aaKnown RBP14.63□□□□□ -0.07
SF3B3-206ENST00000565990 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
SF3B3-206ENST00000565990 PNMA2Q9UL42 364 aa14.63□□□□□ -0.07
SF3B3-206ENST00000565990 PNMA6FA0A0J9YX94 578 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 ZBTB5O15062 677 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 PRPF3O43395 683 aaKnown RBP14.62□□□□□ -0.07
SF3B3-206ENST00000565990 MGAMO43451 1857 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 PEX10O60683 326 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 CTDNEP1O95476 244 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 ICAM1P05362 532 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 STAT3P40763 770 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 IKQ13123 557 aaPredicted RBP14.62□□□□□ -0.07
SF3B3-206ENST00000565990 STK3Q13188 491 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 FAM110CQ1W6H9 321 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 TMX3Q96JJ7 454 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 CPA4Q9UI42 421 aa14.62□□□□□ -0.07
SF3B3-206ENST00000565990 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
SF3B3-206ENST00000565990 V9GY48 417 aaPredicted RBP14.62□□□□□ -0.07
SF3B3-206ENST00000565990 DDX11L8A8MPP1 907 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 SNAP25P60880 206 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 ERVK-9P63128 1117 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 ERVK-24P63145 666 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
SF3B3-206ENST00000565990 QRICH1Q2TAL8 776 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 NOL8Q76FK4 1167 aaKnown RBP14.61□□□□□ -0.07
SF3B3-206ENST00000565990 CCDC82Q8N4S0 544 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 SHCBP1Q8NEM2 672 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 PIGSQ96S52 555 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 LLPHQ9BRT6 129 aaKnown RBP14.61□□□□□ -0.07
SF3B3-206ENST00000565990 BEGAINQ9BUH8 593 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 RNF26Q9BY78 433 aaPredicted RBP14.61□□□□□ -0.07
SF3B3-206ENST00000565990 SPATC1LQ9H0A9 340 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 DOCK3Q8IZD9 2030 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 CNTNAP5Q8WYK1 1306 aa14.61□□□□□ -0.07
SF3B3-206ENST00000565990 GPR25O00155 361 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 PPP1R11O60927 126 aaPredicted RBP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 FMNL1O95466 1100 aaPredicted RBP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 SLC25A27O95847 323 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 CUL4AQ13619 759 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 PKN1Q16512 942 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 RIOX2Q8IUF8 465 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 RRP36Q96EU6 259 aaKnown RBP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 AGBL1Q96MI9 1066 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 TEX13BQ9BXU2 312 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 MAF1Q9H063 256 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 RBM27Q9P2N5 1060 aaKnown RBP14.6□□□□□ -0.07
SF3B3-206ENST00000565990 RIPK3Q9Y572 518 aa14.6□□□□□ -0.07
SF3B3-206ENST00000565990 CPLX1O14810 134 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 CDKL5O76039 1030 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 FDPSP14324 419 aaKnown RBP14.59□□□□□ -0.07
SF3B3-206ENST00000565990 SP3Q02447 781 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 TRAF1Q13077 416 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 PFKFB3Q16875 520 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-206ENST00000565990 TKFCQ3LXA3 575 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 CPLX2Q6PUV4 134 aaKnown RBP14.59□□□□□ -0.07
SF3B3-206ENST00000565990 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
SF3B3-206ENST00000565990 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 MROH8Q9H579 483 aa14.59□□□□□ -0.07
SF3B3-206ENST00000565990 MCM4P33991 863 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 COPB2P35606 906 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 DDIT3P35638 169 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 CCNA1P78396 465 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 SSRP1Q08945 709 aaKnown RBP14.58□□□□□ -0.08
SF3B3-206ENST00000565990 SNRNP48Q6IEG0 339 aaKnown RBP14.58□□□□□ -0.08
SF3B3-206ENST00000565990 CCDC174Q6PII3 467 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
SF3B3-206ENST00000565990 FBXO11Q86XK2 927 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 CPXCR1Q8N123 301 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 RGS22Q8NE09 1264 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 CHST13Q8NET6 341 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 PHKBQ93100 1093 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 STK36Q9NRP7 1315 aa14.58□□□□□ -0.08
SF3B3-206ENST00000565990 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
SF3B3-206ENST00000565990 STRNO43815 780 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 ERCC3P19447 782 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 LACTBP83111 547 aaPredicted RBP14.57□□□□□ -0.08
SF3B3-206ENST00000565990 CCDC83Q8IWF9 413 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 TRIM22Q8IYM9 498 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 PORCNQ9H237 461 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms