RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 FKTNO75072 461 aa19.34■□□□□ 0.69
RNF40-207ENST00000565931 LARGE1O95461 756 aa19.34■□□□□ 0.69
RNF40-207ENST00000565931 CTCFP49711 727 aaPredicted RBP19.34■□□□□ 0.69
RNF40-207ENST00000565931 STK3Q13188 491 aa19.34■□□□□ 0.69
RNF40-207ENST00000565931 PLS1Q14651 629 aa19.34■□□□□ 0.69
RNF40-207ENST00000565931 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
RNF40-207ENST00000565931 ZNF296Q8WUU4 475 aaPredicted RBP19.34■□□□□ 0.69
RNF40-207ENST00000565931 TEX13BQ9BXU2 312 aa19.34■□□□□ 0.69
RNF40-207ENST00000565931 SLKQ9H2G2 1235 aaPredicted RBP19.34■□□□□ 0.69
RNF40-207ENST00000565931 RLFQ13129 1914 aa19.33■□□□□ 0.69
RNF40-207ENST00000565931 CD2BP2O95400 341 aaKnown RBP19.33■□□□□ 0.68
RNF40-207ENST00000565931 ICAM1P05362 532 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 CCNA1P78396 465 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 SCRN1Q12765 414 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 NTRK3Q16288 839 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 CDC37Q16543 378 aaPredicted RBP19.33■□□□□ 0.68
RNF40-207ENST00000565931 QRICH1Q2TAL8 776 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 RIOX2Q8IUF8 465 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 CCDC82Q8N4S0 544 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 AGBL1Q96MI9 1066 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 PIGSQ96S52 555 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 PORCNQ9H237 461 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 RIPK3Q9Y572 518 aa19.33■□□□□ 0.68
RNF40-207ENST00000565931 SLC25A27O95847 323 aa19.32■□□□□ 0.68
RNF40-207ENST00000565931 LACTBP83111 547 aaPredicted RBP19.32■□□□□ 0.68
RNF40-207ENST00000565931 SNRNP48Q6IEG0 339 aaKnown RBP19.32■□□□□ 0.68
RNF40-207ENST00000565931 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
RNF40-207ENST00000565931 SHCBP1Q8NEM2 672 aa19.32■□□□□ 0.68
RNF40-207ENST00000565931 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
RNF40-207ENST00000565931 EFCC1Q9HA90 598 aa19.32■□□□□ 0.68
RNF40-207ENST00000565931 CNTNAP5Q8WYK1 1306 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 ZBTB5O15062 677 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 ERCC3P19447 782 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 CTGFP29279 349 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 MCM2P49736 904 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 LBX1P52954 281 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 CAP1Q01518 475 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 HOMER1Q86YM7 354 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 PIBF1Q8WXW3 757 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 RRP36Q96EU6 259 aaKnown RBP19.31■□□□□ 0.68
RNF40-207ENST00000565931 ARHGAP39Q9C0H5 1083 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 PNMA2Q9UL42 364 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
RNF40-207ENST00000565931 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
RNF40-207ENST00000565931 IFNAR1P17181 557 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 TAL1P17542 331 aaPredicted RBP19.3■□□□□ 0.68
RNF40-207ENST00000565931 MAPK4P31152 587 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 COPB2P35606 906 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 PSMC4P43686 418 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 SLC4A3P48751 1232 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 ST3GAL1Q11201 340 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 NCAPG2Q86XI2 1143 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 FBXO11Q86XK2 927 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 CD99L2Q8TCZ2 262 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 GTF3C6Q969F1 213 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 ERO1AQ96HE7 468 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 MROH8Q9H579 483 aa19.3■□□□□ 0.68
RNF40-207ENST00000565931 V9GY48 417 aaPredicted RBP19.3■□□□□ 0.68
RNF40-207ENST00000565931 A0A0G2JMZ2 1700 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 hCG_1642624A0A1W2PR95 340 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 CPLX1O14810 134 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 ECM2O94769 699 aaPredicted RBP19.29■□□□□ 0.68
RNF40-207ENST00000565931 ALAS1P13196 640 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 KIF22Q14807 665 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 TKFCQ3LXA3 575 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 CPLX2Q6PUV4 134 aaKnown RBP19.29■□□□□ 0.68
RNF40-207ENST00000565931 CCAR1Q8IX12 1150 aaKnown RBP19.29■□□□□ 0.68
RNF40-207ENST00000565931 AMNQ9BXJ7 453 aa19.29■□□□□ 0.68
RNF40-207ENST00000565931 SH2B1Q9NRF2 756 aaPredicted RBP19.29■□□□□ 0.68
RNF40-207ENST00000565931 PRPF3O43395 683 aaKnown RBP19.28■□□□□ 0.68
RNF40-207ENST00000565931 FCGRTP55899 365 aa19.28■□□□□ 0.68
RNF40-207ENST00000565931 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
RNF40-207ENST00000565931 PHKBQ93100 1093 aa19.28■□□□□ 0.68
RNF40-207ENST00000565931 TRIM47Q96LD4 638 aa19.28■□□□□ 0.68
RNF40-207ENST00000565931 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
RNF40-207ENST00000565931 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
RNF40-207ENST00000565931 SEC63Q9UGP8 760 aaKnown RBP19.28■□□□□ 0.68
RNF40-207ENST00000565931 TNPO2O14787 897 aaKnown RBP19.27■□□□□ 0.68
RNF40-207ENST00000565931 PPFIA3O75145 1194 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
RNF40-207ENST00000565931 CTDNEP1O95476 244 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 USH1GQ495M9 461 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 WDR78Q5VTH9 848 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.27■□□□□ 0.68
RNF40-207ENST00000565931 GPR142Q7Z601 462 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 PLEKHH3Q7Z736 793 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 TMX3Q96JJ7 454 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 RNF26Q9BY78 433 aaPredicted RBP19.27■□□□□ 0.68
RNF40-207ENST00000565931 FBXO40Q9UH90 709 aa19.27■□□□□ 0.68
RNF40-207ENST00000565931 ABCB11O95342 1321 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 PARP14Q460N5 1801 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 PTPREP23469 700 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 TRAF1Q13077 416 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 ARHGEF6Q15052 776 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 MUM1L1Q5H9M0 696 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 CCDC83Q8IWF9 413 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 CLEC4DQ8WXI8 215 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 SLC26A6Q9BXS9 759 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms