RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PRR12Q9ULL5 1215 aa19.65■□□□□ 0.74
USB1-211ENST00000565662 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
USB1-211ENST00000565662 PGK2P07205 417 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 SNHG28P0DPA3 235 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 PDHBP11177 359 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 SYDE2Q5VT97 1194 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 TBC1D10CQ8IV04 446 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 UBAC1Q9BSL1 405 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 KAT14Q9H8E8 782 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 SPC25Q9HBM1 224 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 FAM184BQ9ULE4 1060 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 WDR19Q8NEZ3 1342 aa19.64■□□□□ 0.73
USB1-211ENST00000565662 CEP290O15078 2479 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 NEDD4P46934 1319 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 POTEB2H3BUK9 544 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 NMT2O60551 498 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 GSPT1P15170 499 aaKnown RBP19.63■□□□□ 0.73
USB1-211ENST00000565662 PDE4AP27815 886 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 ASPRV1Q53RT3 343 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
USB1-211ENST00000565662 ANKS1AQ92625 1134 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 TRERF1Q96PN7 1200 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 XPNPEP3Q9NQH7 507 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 ADD3Q9UEY8 706 aaKnown RBP19.63■□□□□ 0.73
USB1-211ENST00000565662 CCPG1Q9ULG6 757 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 RIPK3Q9Y572 518 aa19.63■□□□□ 0.73
USB1-211ENST00000565662 B4DLN1 442 aa19.62■□□□□ 0.73
USB1-211ENST00000565662 MRPL12P52815 198 aaKnown RBP19.62■□□□□ 0.73
USB1-211ENST00000565662 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
USB1-211ENST00000565662 SART3Q15020 963 aaKnown RBP19.62■□□□□ 0.73
USB1-211ENST00000565662 TRPV1Q8NER1 839 aa19.62■□□□□ 0.73
USB1-211ENST00000565662 ZSCAN10Q96SZ4 725 aaPredicted RBP19.62■□□□□ 0.73
USB1-211ENST00000565662 TSEN34Q9BSV6 310 aaKnown RBP19.62■□□□□ 0.73
USB1-211ENST00000565662 PRKAG2Q9UGJ0 569 aa19.62■□□□□ 0.73
USB1-211ENST00000565662 ZNF536O15090 1300 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 KDM4AO75164 1064 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 ALAS1P13196 640 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 BMP8BP34820 402 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 SLC4A3P48751 1232 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 TRAF1Q13077 416 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 C1orf53Q5VUE5 145 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 CHRDL2Q6WN34 429 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 C7orf61Q8IZ16 206 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 PNMA1Q8ND90 353 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 INCENPQ9NQS7 918 aa19.61■□□□□ 0.73
USB1-211ENST00000565662 ERICH2A1L162 156 aa19.6■□□□□ 0.73
USB1-211ENST00000565662 MOXD2PA6NHM9 499 aa19.6■□□□□ 0.73
USB1-211ENST00000565662 DUSP11O75319 330 aaKnown RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 CHMLP26374 656 aa19.6■□□□□ 0.73
USB1-211ENST00000565662 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 RALYLQ86SE5 291 aaKnown RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 SENP6Q9GZR1 1112 aaPredicted RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 A1CFQ9NQ94 594 aaKnown RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 HOMER2Q9NSB8 354 aa19.6■□□□□ 0.73
USB1-211ENST00000565662 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 COLQQ9Y215 455 aaPredicted RBP19.6■□□□□ 0.73
USB1-211ENST00000565662 TACC3Q9Y6A5 838 aa19.6■□□□□ 0.73
USB1-211ENST00000565662 TNKSO95271 1327 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 ZNF865P0CJ78 1059 aaPredicted RBP19.59■□□□□ 0.73
USB1-211ENST00000565662 ACVR2BQ13705 512 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 LRRC41Q15345 812 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 IFIT1BQ5T764 474 aaKnown RBP19.59■□□□□ 0.73
USB1-211ENST00000565662 KIAA1211Q6ZU35 1233 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 FAM133AQ8N9E0 248 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 PCSK9Q8NBP7 692 aaKnown RBP19.59■□□□□ 0.73
USB1-211ENST00000565662 NUP133Q8WUM0 1156 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 ZHX1Q9UKY1 873 aaPredicted RBP19.59■□□□□ 0.73
USB1-211ENST00000565662 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
USB1-211ENST00000565662 B4E1Z4 1266 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 SGSM2O43147 1006 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 CST5P28325 142 aaPredicted RBP19.58■□□□□ 0.72
USB1-211ENST00000565662 CCDC174Q6PII3 467 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 CASC1Q6TDU7 716 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 ARMCX2Q7L311 632 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 AGBL1Q96MI9 1066 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 MTA3Q9BTC8 594 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 SEZ6LQ9BYH1 1024 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 PHF24Q9UPV7 400 aa19.58■□□□□ 0.72
USB1-211ENST00000565662 MROH7Q68CQ1 1323 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 SNX17Q15036 470 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 NCOA7Q8NI08 942 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 PRO3102Q9H379 93 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 CYP39A1Q9NYL5 469 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 ZSWIM5Q9P217 1185 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 PCDH10Q9P2E7 1040 aa19.57■□□□□ 0.72
USB1-211ENST00000565662 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
USB1-211ENST00000565662 LRRC26Q2I0M4 334 aa19.56■□□□□ 0.72
USB1-211ENST00000565662 GJC2Q5T442 439 aaPredicted RBP19.56■□□□□ 0.72
USB1-211ENST00000565662 CCDC144CPQ8IYA2 1237 aa19.56■□□□□ 0.72
USB1-211ENST00000565662 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
USB1-211ENST00000565662 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
USB1-211ENST00000565662 DNERQ8NFT8 737 aa19.56■□□□□ 0.72
USB1-211ENST00000565662 LBHD1Q9BQE6 289 aaPredicted RBP19.56■□□□□ 0.72
USB1-211ENST00000565662 VTA1Q9NP79 307 aa19.56■□□□□ 0.72
USB1-211ENST00000565662 GPCPD1Q9NPB8 672 aa19.56■□□□□ 0.72
USB1-211ENST00000565662 ABCB11O95342 1321 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 FRMPD2Q68DX3 1309 aaPredicted RBP19.55■□□□□ 0.72
USB1-211ENST00000565662 SMCHD1A6NHR9 2005 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 LRRC37A2A6NM11 1700 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 SNAI1O95863 264 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms