RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CHEK2O96017 543 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 APOA1P02647 267 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 FLOT2Q14254 428 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 RAPH1Q70E73 1250 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 STX19Q8N4C7 294 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 CEP70Q8NHQ1 597 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 STAMBPL1Q96FJ0 436 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 THUMPD2Q9BTF0 503 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 KIAA1468Q9P260 1216 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 EPN1Q9Y6I3 576 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 TADA3O75528 432 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 C4BPBP20851 252 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 IQCB1Q15051 598 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 HERC4Q5GLZ8 1057 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 MYCT1Q8N699 235 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 U2AF1L4Q8WU68 220 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 MTRQ99707 1265 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 SKOR1P84550 965 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 DRP2Q13474 957 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 ART3Q13508 389 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 RMDN2Q96LZ7 410 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 TTLL3Q9Y4R7 772 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 MSH6P52701 1360 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 SYCE1LA8MT33 242 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 MCF2LO15068 1137 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 TTC38Q5R3I4 469 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 TADA2BQ86TJ2 420 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 PSMB7Q99436 277 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 KIF9Q9HAQ2 790 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 CDC23Q9UJX2 597 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 TRPA1O75762 1119 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 NSFP46459 744 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 XPO4Q9C0E2 1151 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 KRT82Q9NSB4 513 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 ARMCX3Q9UH62 379 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 DBNLQ9UJU6 430 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 NUP160Q12769 1436 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 CFAP73A6NFT4 308 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 A6NJR5 290 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 LDHBP07195 334 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 MMEP08473 750 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 MPRIPQ6WCQ1 1025 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 ZC3H18Q86VM9 953 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 PLEKHM2Q8IWE5 1019 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 CHCHD3Q9NX63 227 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 RASSF10A6NK89 507 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 DEAF1O75398 565 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 ATF7P17544 494 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 EMBQ6PCB8 327 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 PBKQ96KB5 322 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 FMO2Q99518 471 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 METTL14Q9HCE5 456 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 BATF3Q9NR55 127 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 NR1D1P20393 614 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 MRPS15P82914 257 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 ICA1LQ8NDH6 482 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 ENOX1Q8TC92 643 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 LRRC2Q9BYS8 371 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 C10orf88Q9H8K7 445 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 H3BRJ5 948 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 PDE1BQ01064 536 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 KRR1Q13601 381 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 TRIM59Q8IWR1 403 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 CACTINQ8WUQ7 758 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 SETDB2Q96T68 719 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 SUCLA2Q9P2R7 463 aaPredicted RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 CFAP43Q8NDM7 1665 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 RWDD2BP57060 319 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 ZNF174Q15697 407 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 SLFNL1Q499Z3 407 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 RUBCNQ92622 972 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 MCM9Q9NXL9 1143 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 TRPC5Q9UL62 973 aaPredicted RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 IQSEC3Q9UPP2 1182 aaPredicted RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 PGRMC1O00264 195 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 CASP2P42575 452 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 RCN2Q14257 317 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 OPTNQ96CV9 577 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 RRAGDQ9NQL2 400 aaPredicted RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 TYW5A2RUC4 315 aaKnown RBP5.53□□□□□ -1.52
SMG1-211ENST00000565324 BFSP1Q12934 665 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 MED21Q13503 144 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 PLS1Q14651 629 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 ARHGAP44Q17R89 818 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 KRT39Q6A163 491 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 LINS1Q8NG48 757 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 C1orf112Q9NSG2 853 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 STMN3Q9NZ72 180 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 CHPF2Q9P2E5 772 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 USTQ9Y2C2 406 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 ADGBQ8N7X0 1667 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 MYH10P35580 1976 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 MSH2P43246 934 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 MORF4L2Q15014 288 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMG1-211ENST00000565324 FGD4Q96M96 766 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
SMG1-211ENST00000565324 DONSONQ9NYP3 566 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms