RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CCDC42Q96M95 316 aa22.9■■□□□ 1.26
MAP1LC3B-206ENST00000564844 TUBBP07437 444 aa22.89■■□□□ 1.26
MAP1LC3B-206ENST00000564844 HNRNPH1P31943 449 aaKnown RBP22.89■■□□□ 1.26
MAP1LC3B-206ENST00000564844 KRT83P78385 493 aa22.89■■□□□ 1.26
MAP1LC3B-206ENST00000564844 ESR2Q92731 530 aa22.89■■□□□ 1.26
MAP1LC3B-206ENST00000564844 SCN11AQ9UI33 1791 aa22.89■■□□□ 1.26
MAP1LC3B-206ENST00000564844 ECM29Q5VYK3 1845 aa22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ATP2C1P98194 919 aaPredicted RBP22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CKAP4Q07065 602 aaKnown RBP22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 PUM3Q15397 648 aaKnown RBP22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 C2CD5Q86YS7 1000 aa22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SRBD1Q8N5C6 995 aaKnown RBP22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 LPIN2Q92539 896 aa22.89■■□□□ 1.25
MAP1LC3B-206ENST00000564844 LGALS16A8MUM7 142 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 UQCRFS1P1P0C7P4 283 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CYLC1P35663 651 aaPredicted RBP22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 GUCY1A3Q02108 690 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NPY5RQ15761 445 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ABCC12Q96J65 1359 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ALX1Q15699 326 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 RNF187Q5TA31 235 aaPredicted RBP22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ZSCAN10Q96SZ4 725 aaPredicted RBP22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 MYH13Q9UKX3 1938 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TRIM14Q14142 442 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TTMPQ5BVD1 217 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FAM184BQ9ULE4 1060 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CAPN11Q9UMQ6 739 aa22.88■■□□□ 1.25
MAP1LC3B-206ENST00000564844 RASSF10A6NK89 507 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TRADDQ15628 312 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TMTC2Q8N394 836 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 MSL3Q8N5Y2 521 aaKnown RBP22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 MAP3K15Q6ZN16 1313 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 H7C1D1 291 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 BACH1O14867 736 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ARID4AP29374 1257 aaPredicted RBP22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SEC24CP53992 1094 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SEC23AQ15436 765 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SPA17Q15506 151 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CCDC70Q6NSX1 233 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CREG2Q8IUH2 290 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 DNAJC7Q99615 494 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 AKAP11Q9UKA4 1901 aa22.87■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FCER1AP12319 257 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 MCM3P25205 808 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 PPFIA1Q13136 1202 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 KCNV1Q6PIU1 500 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SPATA4Q8NEY3 305 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 MMRN2Q9H8L6 949 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 EPHB6O15197 1021 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SLC5A1P13866 664 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ADSSL1Q8N142 457 aa22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NOC4LQ9BVI4 516 aaKnown RBP22.86■■□□□ 1.25
MAP1LC3B-206ENST00000564844 EIF3HO15372 352 aaKnown RBP eCLIP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FUT2Q10981 343 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 IFIH1Q9BYX4 1025 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TMEM60Q9H2L4 133 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FAM153BP0C7A2 387 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FAM153CQ494X1 144 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 MCTP2Q6DN12 878 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 JPH2Q9BR39 696 aaPredicted RBP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 RNF41Q9H4P4 317 aaPredicted RBP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 EXOC1Q9NV70 894 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FAM153AQ9UHL3 310 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ZBTB1Q9Y2K1 713 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 GRIN2DO15399 1336 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 GIGYF2Q6Y7W6 1299 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ZNF507Q8TCN5 953 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 AENQ8WTP8 325 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FBXO3Q9UK99 471 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NFU1Q9UMS0 254 aa22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 PACSIN2Q9UNF0 486 aaPredicted RBP22.85■■□□□ 1.25
MAP1LC3B-206ENST00000564844 AKR1B10O60218 316 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ATP2C2O75185 946 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 HPDP32754 393 aaPredicted RBP22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 UBA7P41226 1012 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 GYG1P46976 350 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CCDC155Q8N6L0 562 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 FAM205AQ6ZU69 1335 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ANKRD40Q6AI12 368 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SAMD1Q6SPF0 538 aaPredicted RBP22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 LRRC15Q8TF66 581 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CNOT6LQ96LI5 555 aaKnown RBP22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CCDC43Q96MW1 224 aaKnown RBP22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SALL4Q9UJQ4 1053 aa22.84■■□□□ 1.25
MAP1LC3B-206ENST00000564844 PSMA7O14818 248 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 PRPF3O43395 683 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SSBP05455 408 aaKnown RBP eCLIP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 ZIM3Q96PE6 472 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NCAPGQ9BPX3 1015 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CPVLQ9H3G5 476 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 RBM12Q9NTZ6 932 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 WDR17Q8IZU2 1322 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NUTM2BA6NNL0 878 aaPredicted RBP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NUTM2EB1AL46 878 aaPredicted RBP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CARSP49589 748 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TROAPQ12815 778 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NNTQ13423 1086 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 NAALADL2Q58DX5 795 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 CCDC24Q8N4L8 307 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms