RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 MAP4K1Q92918 833 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 AGBL1Q96MI9 1066 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 TNKSO95271 1327 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 ALAS1P13196 640 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 CYBAP13498 195 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 ZNF543Q08ER8 600 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 TKFCQ3LXA3 575 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 SYDE2Q5VT97 1194 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 LHX8Q68G74 356 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 PNMA1Q8ND90 353 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 ANKS1AQ92625 1134 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 ACAD9Q9H845 621 aa21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 DDX20Q9UHI6 824 aaKnown RBP21.52■■□□□ 1.04
SYNGR3-204ENST00000564642 ZNF536O15090 1300 aa21.52■■□□□ 1.03
SYNGR3-204ENST00000564642 PRAMEF19Q5SWL8 479 aa21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 GPATCH4Q5T3I0 446 aaKnown RBP21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■■■■□ 25.5
SYNGR3-204ENST00000564642 ENAHQ8N8S7 591 aaPredicted RBP21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 TRPV1Q8NER1 839 aa21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 TINF2Q9BSI4 451 aa21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 ESYT1Q9BSJ8 1104 aa21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 RNF146Q9NTX7 359 aa21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 RBM8AQ9Y5S9 174 aaKnown RBP21.51■■□□□ 1.03
SYNGR3-204ENST00000564642 SNHG28P0DPA3 235 aa21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 RALYLQ86SE5 291 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 NCOA7Q8NI08 942 aa21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 DIS3LQ8TF46 1054 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 RANBP17Q9H2T7 1088 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 CCPG1Q9ULG6 757 aa21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
SYNGR3-204ENST00000564642 DNAJC25-GNG10A0A024R161 153 aa21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 E7EWF7 191 aa21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 ICAM1P05362 532 aa21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 CASC1Q6TDU7 716 aa21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 CYB5R4Q7L1T6 521 aa21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 MSL3Q8N5Y2 521 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 NRBP1Q9UHY1 535 aa21.49■■□□□ 1.03
SYNGR3-204ENST00000564642 ERICH2A1L162 156 aa21.48■■□□□ 1.03
SYNGR3-204ENST00000564642 SEPT4O43236 478 aa21.48■■□□□ 1.03
SYNGR3-204ENST00000564642 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
SYNGR3-204ENST00000564642 C11orf49Q9H6J7 331 aa21.48■■□□□ 1.03
SYNGR3-204ENST00000564642 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
SYNGR3-204ENST00000564642 MKI67P46013 3256 aaKnown RBP21.47■■□□□ 1.03
SYNGR3-204ENST00000564642 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
SYNGR3-204ENST00000564642 ZNF467Q7Z7K2 595 aaPredicted RBP21.47■■□□□ 1.03
SYNGR3-204ENST00000564642 LSG1Q9H089 658 aaKnown RBP21.47■■□□□ 1.03
SYNGR3-204ENST00000564642 ANO2Q9NQ90 1003 aa21.47■■□□□ 1.03
SYNGR3-204ENST00000564642 PNMA2Q9UL42 364 aa21.47■■□□□ 1.03
SYNGR3-204ENST00000564642 POTEB2H3BUK9 544 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 IFIT3O14879 490 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 PARP1P09874 1014 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 MNX1P50219 401 aaPredicted RBP21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 SART3Q15020 963 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 SEC23AQ15436 765 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 ASPRV1Q53RT3 343 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 MUM1L1Q5H9M0 696 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 MAMDC4Q6UXC1 1216 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 UBA5Q9GZZ9 404 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 PFASO15067 1338 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 SYNGAP1Q96PV0 1343 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 SMCHD1A6NHR9 2005 aa21.46■■□□□ 1.03
SYNGR3-204ENST00000564642 EVI5O60447 810 aa21.45■■□□□ 1.02
SYNGR3-204ENST00000564642 ANO1Q5XXA6 986 aa21.45■■□□□ 1.02
SYNGR3-204ENST00000564642 NR2E3Q9Y5X4 410 aa21.45■■□□□ 1.02
SYNGR3-204ENST00000564642 TAF6LQ9Y6J9 622 aa21.45■■□□□ 1.02
SYNGR3-204ENST00000564642 CDC45O75419 566 aa21.44■■□□□ 1.02
SYNGR3-204ENST00000564642 CNTN2Q02246 1040 aa21.44■■□□□ 1.02
SYNGR3-204ENST00000564642 NSMFQ6X4W1 530 aa21.44■■□□□ 1.02
SYNGR3-204ENST00000564642 STOX1Q6ZVD7 989 aa21.44■■□□□ 1.02
SYNGR3-204ENST00000564642 ARRDC4Q8NCT1 418 aa21.44■■□□□ 1.02
SYNGR3-204ENST00000564642 DHX16O60231 1041 aaKnown RBP21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 SNAI1O95863 264 aaPredicted RBP21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 ZNF865P0CJ78 1059 aaPredicted RBP21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 TAL1P17542 331 aaPredicted RBP21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 WTAPQ15007 396 aa21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 CHST3Q7LGC8 479 aa21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 FAM133AQ8N9E0 248 aa21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 CPVLQ9H3G5 476 aa21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 CYP39A1Q9NYL5 469 aa21.43■■□□□ 1.02
SYNGR3-204ENST00000564642 H0YGN5 161 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 SLC27A2O14975 620 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 MCM3APO60318 1980 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 MYCNP04198 464 aaPredicted RBP21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 RARBP10826 455 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 AKR1A1P14550 325 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 ADGRF4Q8IZF3 695 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 ABHD16BQ9H3Z7 469 aa21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 ZHX1Q9UKY1 873 aaPredicted RBP21.42■■□□□ 1.02
SYNGR3-204ENST00000564642 MYH6P13533 1939 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 WDR19Q8NEZ3 1342 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 ASB14A6NK59 587 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 KBTBD13C9JR72 458 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 DNM1LO00429 736 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 COL6A1P12109 1028 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 ACVR2BQ13705 512 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms