RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ZNF512BQ96KM6 892 aaPredicted RBP6.84□□□□□ -1.31
CHD9-210ENST00000564582 TINF2Q9BSI4 451 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 DUSP13Q9UII6 198 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 PCDHB12Q9Y5F1 795 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 ARHGEF12Q9NZN5 1544 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 BLMP54132 1417 aaPredicted RBP6.84□□□□□ -1.32
CHD9-210ENST00000564582 PARD3Q8TEW0 1356 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 LTKP29376 864 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 RUFY4Q6ZNE9 571 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 CREG2Q8IUH2 290 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 CREBRFQ8IUR6 639 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 TSPYL1Q9H0U9 437 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 PHAXQ9H814 394 aaKnown RBP6.83□□□□□ -1.32
CHD9-210ENST00000564582 CARS2Q9HA77 564 aaKnown RBP6.83□□□□□ -1.32
CHD9-210ENST00000564582 POGKQ9P215 609 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 PRDM4Q9UKN5 801 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 FBXL21Q9UKT6 434 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 CFTRP13569 1480 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 TEX14Q8IWB6 1497 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 FHOD3Q2V2M9 1422 aa6.83□□□□□ -1.32
CHD9-210ENST00000564582 PCF11O94913 1555 aaKnown RBP6.82□□□□□ -1.32
CHD9-210ENST00000564582 DNAJA1P31689 397 aaKnown RBP6.82□□□□□ -1.32
CHD9-210ENST00000564582 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
CHD9-210ENST00000564582 TNNI3KQ59H18 835 aa6.82□□□□□ -1.32
CHD9-210ENST00000564582 TAF7LQ5H9L4 462 aa6.82□□□□□ -1.32
CHD9-210ENST00000564582 TTC6Q86TZ1 520 aa6.82□□□□□ -1.32
CHD9-210ENST00000564582 HSCBQ8IWL3 235 aa6.82□□□□□ -1.32
CHD9-210ENST00000564582 SYTL5Q8TDW5 730 aaPredicted RBP6.82□□□□□ -1.32
CHD9-210ENST00000564582 SNX21Q969T3 373 aa6.82□□□□□ -1.32
CHD9-210ENST00000564582 RC3H2Q9HBD1 1191 aaKnown RBP6.82□□□□□ -1.32
CHD9-210ENST00000564582 ARHGEF11O15085 1522 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 KIF16BQ96L93 1317 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 POLA1P09884 1462 aaPredicted RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 RALGAPBQ86X10 1494 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 CC2D2AQ9P2K1 1620 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 BIN1O00499 593 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 CANXP27824 592 aaKnown RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 CASP7P55210 303 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 AUHQ13825 339 aaKnown RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 ZYXQ15942 572 aaKnown RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 GAB4Q2WGN9 574 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 CLEC17AQ6ZS10 378 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 PDCL2Q8N4E4 241 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 CCDC94Q9BW85 323 aaPredicted RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 SLKQ9H2G2 1235 aaPredicted RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 CHMP4BQ9H444 224 aaKnown RBP6.81□□□□□ -1.32
CHD9-210ENST00000564582 PRR13Q9NZ81 148 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 ADGRE2Q9UHX3 823 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 UGGT2Q9NYU1 1516 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 CUL7Q14999 1698 aa6.81□□□□□ -1.32
CHD9-210ENST00000564582 A0A1W2PQH9 124 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 SSU72P8A0A1W2PR75 194 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 SIGLEC6O43699 453 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 EGR3Q06889 387 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 DMTNQ08495 405 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 GNPTABQ3T906 1256 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 TDRD10Q5VZ19 366 aaKnown RBP6.8□□□□□ -1.32
CHD9-210ENST00000564582 SASS6Q6UVJ0 657 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 ALPK1Q96QP1 1244 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 HDAC8Q9BY41 377 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 PRDM14Q9GZV8 571 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 RWDD1Q9H446 243 aaPredicted RBP6.8□□□□□ -1.32
CHD9-210ENST00000564582 MBNL3Q9NUK0 354 aaKnown RBP6.8□□□□□ -1.32
CHD9-210ENST00000564582 ZNF214Q9UL59 606 aaPredicted RBP6.8□□□□□ -1.32
CHD9-210ENST00000564582 NOL7Q9UMY1 257 aaKnown RBP6.8□□□□□ -1.32
CHD9-210ENST00000564582 CLASP1Q7Z460 1538 aa6.8□□□□□ -1.32
CHD9-210ENST00000564582 KIF14Q15058 1648 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 SHISA3A0PJX4 238 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 C9IYK1 514 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 ESR1P03372 595 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 TPM3P06753 285 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
CHD9-210ENST00000564582 FGRP09769 529 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 CT47B1P0C2W7 299 aaPredicted RBP6.79□□□□□ -1.32
CHD9-210ENST00000564582 PCBP3P57721 371 aaKnown RBP6.79□□□□□ -1.32
CHD9-210ENST00000564582 SLC7A5Q01650 507 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 TCEAL1Q15170 157 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 ANKRD39Q53RE8 183 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 NAALADL2Q58DX5 795 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 CBLL1Q75N03 491 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 TMC3Q7Z5M5 1100 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 GMLQ99445 158 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 CHST7Q9NS84 486 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 MRVI1Q9Y6F6 885 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 MBD5Q9P267 1494 aa6.79□□□□□ -1.32
CHD9-210ENST00000564582 PTPRKQ15262 1439 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 KIAA1107Q9UPP5 1409 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 PRAMEF1O95521 474 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 TP53P04637 393 aaPredicted RBP6.78□□□□□ -1.32
CHD9-210ENST00000564582 SNW1Q13573 536 aaKnown RBP6.78□□□□□ -1.32
CHD9-210ENST00000564582 WDR43Q15061 677 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHD9-210ENST00000564582 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
CHD9-210ENST00000564582 RNF111Q6ZNA4 994 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms