RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 CDK5R2Q13319 367 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 TTLL4Q14679 1199 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 CYP27C1Q4G0S4 372 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 ZC3H12AQ5D1E8 599 aaKnown RBP5.65□□□□□ -1.5
CAPN3-212ENST00000564503 DNTTIP2Q5QJE6 756 aaKnown RBP5.65□□□□□ -1.5
CAPN3-212ENST00000564503 TP53INP2Q8IXH6 220 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 TSPYL6Q8N831 410 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 PIBF1Q8WXW3 757 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 NECAB3Q96P71 396 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-212ENST00000564503 FMNL2Q96PY5 1086 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 SETDB2Q96T68 719 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 EMILIN2Q9BXX0 1053 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 OSBPL7Q9BZF2 842 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 WWC3Q9ULE0 1092 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 PTPRCP08575 1304 aa5.65□□□□□ -1.51
CAPN3-212ENST00000564503 RTL1A6NKG5 1358 aa5.65□□□□□ -1.51
CAPN3-212ENST00000564503 AATKQ6ZMQ8 1374 aa5.65□□□□□ -1.51
CAPN3-212ENST00000564503 KDM3BQ7LBC6 1761 aa5.65□□□□□ -1.51
CAPN3-212ENST00000564503 EDC4Q6P2E9 1401 aaKnown RBP5.65□□□□□ -1.51
CAPN3-212ENST00000564503 USP54Q70EL1 1684 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 FAM87AP0C7U9 286 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 HCLS1P14317 486 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-212ENST00000564503 GSTT1P30711 240 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 FMR1Q06787 632 aaKnown RBP eCLIP5.64□□□□□ -1.51
CAPN3-212ENST00000564503 KCNA1Q09470 495 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 ZNF252P-AS1Q0IIN9 211 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.51
CAPN3-212ENST00000564503 COL19A1Q14993 1142 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 MAP1SQ66K74 1059 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-212ENST00000564503 CEP85Q6P2H3 762 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 MPRIPQ6WCQ1 1025 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 TMEM87AQ8NBN3 555 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 GPBAR1Q8TDU6 330 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 IL17RAQ96F46 866 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 TMX3Q96JJ7 454 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 ASB16Q96NS5 453 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 GTPBP4Q9BZE4 634 aaKnown RBP5.64□□□□□ -1.51
CAPN3-212ENST00000564503 CBX8Q9HC52 389 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 PCOLCE2Q9UKZ9 415 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 WDR33Q9C0J8 1336 aaKnown RBP5.64□□□□□ -1.51
CAPN3-212ENST00000564503 LTN1O94822 1766 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 KIAA0232Q92628 1395 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 TSPOAP1O95153 1857 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 NEO1Q92859 1461 aa5.64□□□□□ -1.51
CAPN3-212ENST00000564503 AFDNP55196 1824 aaKnown RBP5.63□□□□□ -1.51
CAPN3-212ENST00000564503 HMOX1P09601 288 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 BMP6P22004 513 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 IL13P35225 146 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 NEK4P51957 841 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 CCDC183Q5T5S1 534 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 ALG1LQ6GMV1 187 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 TPTE2Q6XPS3 522 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 C16orf71Q8IYS4 520 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-212ENST00000564503 FAM177A1Q8N128 213 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-212ENST00000564503 C8orf58Q8NAV2 365 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 RNF214Q8ND24 703 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 FLCNQ8NFG4 579 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 GRIN3AQ8TCU5 1115 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 PHACTR3Q96KR7 559 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 SRCIN1Q9C0H9 1055 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 PAK6Q9NQU5 681 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-212ENST00000564503 DIAPH3Q9NSV4 1193 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 SPTLC3Q9NUV7 552 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 CACNA2D2Q9NY47 1150 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 POLKQ9UBT6 870 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 ARHGEF10O15013 1369 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 PXDNLA1KZ92 1463 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 CPS1P31327 1500 aa5.63□□□□□ -1.51
CAPN3-212ENST00000564503 MARF1Q9Y4F3 1742 aaKnown RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 GOLGA6L6A8MZA4 724 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 ELL2O00472 640 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 ENC1O14682 589 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 GIPC1O14908 333 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 SMARCA5O60264 1052 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 PAGE1O75459 146 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 LEFTY1O75610 366 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 KIF20AO95235 890 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 MX1P20591 662 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 TXKP42681 527 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 PDE1AP54750 535 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 ERVK-24P63145 666 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 CHAF1AQ13111 956 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 SAFB2Q14151 953 aaKnown RBP eCLIP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 GGT6Q6P531 493 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 OTUD7AQ8TE49 926 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 BCL7CQ8WUZ0 217 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 ISL2Q96A47 359 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 THUMPD2Q9BTF0 503 aaKnown RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 CDK19Q9BWU1 502 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 CEP44Q9C0F1 390 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 GOLGA2P5Q9HBQ8 144 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 SSU72Q9NP77 194 aaKnown RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 SLC52A1Q9NWF4 448 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 KIF3AQ9Y496 699 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 RNF114Q9Y508 228 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 AOX1Q06278 1338 aa5.62□□□□□ -1.51
CAPN3-212ENST00000564503 RPAP1Q9BWH6 1393 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-212ENST00000564503 SETD1BQ9UPS6 1966 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms