RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SENP2Q9HC62 589 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 GJD2Q9UKL4 321 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 CASP8AP2Q9UKL3 1982 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 ZNF536O15090 1300 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 ZNF236Q9UL36 1845 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 ZBTB43O43298 467 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 FCER1AP12319 257 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 RGS2P41220 211 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 COL13A1Q5TAT6 717 aaPredicted RBP19.41■□□□□ 0.7
RNF40-206ENST00000564260 SAMD1Q6SPF0 538 aaPredicted RBP19.41■□□□□ 0.7
RNF40-206ENST00000564260 Q6ZUG5 572 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 RASGRP2Q7LDG7 609 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 NCAPG2Q86XI2 1143 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 RAET1EQ8TD07 263 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 USP6NLQ92738 828 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 MCOLN1Q9GZU1 580 aa19.41■□□□□ 0.7
RNF40-206ENST00000564260 DIS3Q9Y2L1 958 aaKnown RBP19.41■□□□□ 0.7
RNF40-206ENST00000564260 GOLGA8HP0CJ92 632 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 SLC16A2P36021 539 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 FLT3LGP49771 235 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 PRKCZQ05513 592 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 KCTD2Q14681 263 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 TEX2Q8IWB9 1127 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 ADGRF4Q8IZF3 695 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 SAMD3Q8N6K7 520 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 NUP133Q8WUM0 1156 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 APBA2Q99767 749 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 LRRC2Q9BYS8 371 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 ACAD9Q9H845 621 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 CCPG1Q9ULG6 757 aa19.4■□□□□ 0.7
RNF40-206ENST00000564260 KLF18A0A0U1RQI7 1052 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 ZBTB5O15062 677 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 CAP1Q01518 475 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 MAP2K5Q13163 448 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 COL9A3Q14050 684 aaPredicted RBP19.39■□□□□ 0.69
RNF40-206ENST00000564260 CPXCR1Q8N123 301 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 STAG2Q8N3U4 1231 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 RGS22Q8NE09 1264 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 BRF1Q92994 677 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 ZNF274Q96GC6 653 aaPredicted RBP19.39■□□□□ 0.69
RNF40-206ENST00000564260 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 JMJD4Q9H9V9 463 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 RAVER2Q9HCJ3 691 aaKnown RBP19.39■□□□□ 0.69
RNF40-206ENST00000564260 GPHNQ9NQX3 736 aaPredicted RBP19.39■□□□□ 0.69
RNF40-206ENST00000564260 PDRG1Q9NUG6 133 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 PFASO15067 1338 aa19.39■□□□□ 0.69
RNF40-206ENST00000564260 MGAMO43451 1857 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 ABCB11O95342 1321 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 CAPN2P17655 700 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 CDC37Q16543 378 aaPredicted RBP19.38■□□□□ 0.69
RNF40-206ENST00000564260 RTN1Q16799 776 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 WDR78Q5VTH9 848 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 TMTC3Q6ZXV5 915 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 MICU3Q86XE3 530 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 MSL3Q8N5Y2 521 aaKnown RBP19.38■□□□□ 0.69
RNF40-206ENST00000564260 ARMC5Q96C12 935 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 MMP19Q99542 508 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 UBA5Q9GZZ9 404 aa19.38■□□□□ 0.69
RNF40-206ENST00000564260 RBM27Q9P2N5 1060 aaKnown RBP19.38■□□□□ 0.69
RNF40-206ENST00000564260 LOC102724159A0A0B4J2E5 919 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 DHX16O60231 1041 aaKnown RBP19.37■□□□□ 0.69
RNF40-206ENST00000564260 ADORA2AP29274 412 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 METAP2P50579 478 aaKnown RBP eCLIP19.37■□□□□ 0.69
RNF40-206ENST00000564260 PWP2Q15269 919 aaKnown RBP19.37■□□□□ 0.69
RNF40-206ENST00000564260 TCEANC2Q96MN5 208 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 TRERF1Q96PN7 1200 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 AMNQ9BXJ7 453 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 BACH2Q9BYV9 841 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 UPF3BQ9BZI7 483 aaKnown RBP19.37■□□□□ 0.69
RNF40-206ENST00000564260 MAP3K20Q9NYL2 800 aaKnown RBP19.37■□□□□ 0.69
RNF40-206ENST00000564260 PTCH2Q9Y6C5 1203 aa19.37■□□□□ 0.69
RNF40-206ENST00000564260 PNMA6FA0A0J9YX94 578 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 GOLGA8AA7E2F4 631 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 GOLGA8BA8MQT2 603 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 PEX10O60683 326 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 CPA1P15085 419 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 GRK4P32298 578 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 TOB2Q14106 344 aaPredicted RBP19.36■□□□□ 0.69
RNF40-206ENST00000564260 SLC9C1Q4G0N8 1177 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 CCDC174Q6PII3 467 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 ZNF467Q7Z7K2 595 aaPredicted RBP19.36■□□□□ 0.69
RNF40-206ENST00000564260 FBXO11Q86XK2 927 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 TNS4Q8IZW8 715 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 CHMP4CQ96CF2 233 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 RRP36Q96EU6 259 aaKnown RBP19.36■□□□□ 0.69
RNF40-206ENST00000564260 AGBL1Q96MI9 1066 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 RNF146Q9NTX7 359 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 SEC63Q9UGP8 760 aaKnown RBP19.36■□□□□ 0.69
RNF40-206ENST00000564260 BRPF3Q9ULD4 1205 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 GABRQQ9UN88 632 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 MRPL11Q9Y3B7 192 aaKnown RBP19.36■□□□□ 0.69
RNF40-206ENST00000564260 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
RNF40-206ENST00000564260 COL11A1P12107 1806 aaPredicted RBP19.35■□□□□ 0.69
RNF40-206ENST00000564260 hCG_1984214I3L0E3 225 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 ADCY3O60266 1144 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 QRICH1Q2TAL8 776 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 OLFML2BQ68BL8 750 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 DPP9Q86TI2 863 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 MCF2L2Q86YR7 1114 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms