RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ADAMTS6Q9UKP5 1117 aa6.08□□□□□ -1.44
CDR2-203ENST00000563573 TRPM3Q9HCF6 1732 aaPredicted RBP6.08□□□□□ -1.44
CDR2-203ENST00000563573 PIK3C2AO00443 1686 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 USP54Q70EL1 1684 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 ROBO1Q9Y6N7 1651 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 ARHGEF10O15013 1369 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 SPATA31A3Q5VYP0 1347 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 PRAMEF27A3QJZ7 478 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 FAM155AB1AL88 458 aaPredicted RBP6.07□□□□□ -1.44
CDR2-203ENST00000563573 PRPF40AO75400 957 aaKnown RBP6.07□□□□□ -1.44
CDR2-203ENST00000563573 EOMESO95936 686 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 GCP02774 474 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 CD96P40200 585 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 ETF1P62495 437 aaKnown RBP6.07□□□□□ -1.44
CDR2-203ENST00000563573 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 TTBK2Q6IQ55 1244 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 LRFN4Q6PJG9 635 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 AEBP1Q8IUX7 1158 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 DDX17Q92841 729 aaKnown RBP6.07□□□□□ -1.44
CDR2-203ENST00000563573 CCDC120Q96HB5 630 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 SETDB2Q96T68 719 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 TPX2Q9ULW0 747 aaKnown RBP6.07□□□□□ -1.44
CDR2-203ENST00000563573 NHSL1Q5SYE7 1610 aa6.07□□□□□ -1.44
CDR2-203ENST00000563573 LTN1O94822 1766 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 PITPNM2Q9BZ72 1349 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 ZBTB7CA1YPR0 619 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 U2SURPO15042 1029 aaKnown RBP6.06□□□□□ -1.44
CDR2-203ENST00000563573 CENPBP07199 599 aaPredicted RBP6.06□□□□□ -1.44
CDR2-203ENST00000563573 RLBP1P12271 317 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 CYP7A1P22680 504 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 FBLN1P23142 703 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 INPP5AQ14642 412 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 RRS1Q15050 365 aaKnown RBP6.06□□□□□ -1.44
CDR2-203ENST00000563573 PKN1Q16512 942 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 SFRP5Q5T4F7 317 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 SLC38A3Q99624 504 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 AK5Q9Y6K8 562 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CDR2-203ENST00000563573 ALS2Q96Q42 1657 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 OVOS2A0A0J9YW53 1432 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 TNS3Q68CZ2 1445 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 OVOS2Q6IE36 1432 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 KIF24Q5T7B8 1368 aa6.06□□□□□ -1.44
CDR2-203ENST00000563573 PHLPP1O60346 1717 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 PXDNQ92626 1479 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 SLITRK5O94991 958 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
CDR2-203ENST00000563573 U2AF1L5P0DN76 240 aaPredicted RBP6.05□□□□□ -1.44
CDR2-203ENST00000563573 AFMP43652 599 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 U2AF1Q01081 240 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDR2-203ENST00000563573 SLBPQ14493 270 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDR2-203ENST00000563573 CCDC85BQ15834 202 aaPredicted RBP6.05□□□□□ -1.44
CDR2-203ENST00000563573 RASIP1Q5U651 963 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 UBE3DQ7Z6J8 389 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 NPAS4Q8IUM7 802 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 MFSD4AQ8N468 514 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 INSRP06213 1382 aa6.05□□□□□ -1.44
CDR2-203ENST00000563573 ZC3H6P61129 1189 aaKnown RBP6.04□□□□□ -1.44
CDR2-203ENST00000563573 JAG1P78504 1218 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 WIPI1Q5MNZ9 446 aaPredicted RBP6.04□□□□□ -1.44
CDR2-203ENST00000563573 THAP5Q7Z6K1 395 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 ZSWIM9Q86XI8 627 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 KSR1Q8IVT5 923 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 BHLHE22Q8NFJ8 381 aaPredicted RBP6.04□□□□□ -1.44
CDR2-203ENST00000563573 IP6K1Q92551 441 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 GAL3ST3Q96A11 431 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 MIPEPQ99797 713 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 MARF1Q9Y4F3 1742 aaKnown RBP6.04□□□□□ -1.44
CDR2-203ENST00000563573 FLT4P35916 1363 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 PNPLA6Q8IY17 1366 aa6.04□□□□□ -1.44
CDR2-203ENST00000563573 AHDC1Q5TGY3 1603 aaPredicted RBP6.03□□□□□ -1.44
CDR2-203ENST00000563573 MAP3K19Q56UN5 1328 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 SMG6Q86US8 1419 aaKnown RBP6.03□□□□□ -1.44
CDR2-203ENST00000563573 CST3P01034 146 aaPredicted RBP6.03□□□□□ -1.44
CDR2-203ENST00000563573 HOXC9P31274 260 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 IL13P35225 146 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 KIR3DL1P43629 444 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 PTPN11Q06124 597 aaPredicted RBP6.03□□□□□ -1.44
CDR2-203ENST00000563573 PDE4BQ07343 736 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 KCNMB1Q16558 191 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 EAPPQ56P03 285 aaPredicted RBP6.03□□□□□ -1.44
CDR2-203ENST00000563573 HSP90AB2PQ58FF8 381 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 LETMD1Q6P1Q0 360 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 AGMOQ6ZNB7 445 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 ARHGEF25Q86VW2 580 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 NGEFQ8N5V2 710 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 RUNDC1Q96C34 613 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 FAM84AQ96KN4 292 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 SLIT3O75094 1523 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 RTL1A6NKG5 1358 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 RGPD5Q99666 1765 aa6.03□□□□□ -1.44
CDR2-203ENST00000563573 PHRF1Q9P1Y6 1649 aaKnown RBP6.03□□□□□ -1.44
CDR2-203ENST00000563573 CDK12Q9NYV4 1490 aaPredicted RBP6.02□□□□□ -1.44
CDR2-203ENST00000563573 USP19O94966 1318 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 MAPK8IP3Q9UPT6 1336 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 SHPRHQ149N8 1683 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 EVA1CP58658 441 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 EIF4A2Q14240 407 aaKnown RBP6.02□□□□□ -1.45
CDR2-203ENST00000563573 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms