RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 EVI5O60447 810 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 TLR5O60602 858 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 MICAL2O94851 1124 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 APBB3O95704 486 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 DESP17661 470 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 MAGEA8P43361 318 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 MCM2P49736 904 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 AP3B2Q13367 1082 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 EIF4A2Q14240 407 aaKnown RBP5.44□□□□□ -1.54
SMG1-207ENST00000563235 SEMA3AQ14563 771 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 ACAP1Q15027 740 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 ABCB5Q2M3G0 1257 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 EML3Q32P44 896 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 PDE12Q6L8Q7 609 aaKnown RBP5.44□□□□□ -1.54
SMG1-207ENST00000563235 CXorf57Q6NSI4 855 aaKnown RBP5.44□□□□□ -1.54
SMG1-207ENST00000563235 CNTD1Q8N815 330 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 PPP1R14CQ8TAE6 165 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 DDX11Q96FC9 970 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 CAMKK2Q96RR4 588 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 TNKS2Q9H2K2 1166 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 TOPORSQ9NS56 1045 aaPredicted RBP5.44□□□□□ -1.54
SMG1-207ENST00000563235 IFT80Q9P2H3 777 aaPredicted RBP5.44□□□□□ -1.54
SMG1-207ENST00000563235 WDR35Q9P2L0 1181 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 PCDHB3Q9Y5E6 796 aa5.44□□□□□ -1.54
SMG1-207ENST00000563235 ATP1A3P13637 1013 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 AKR1B1P15121 316 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 PRSS12P56730 875 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 POLR2FP61218 127 aaKnown RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 CYP4A11Q02928 519 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 ADCY1Q08828 1119 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 SMAD4Q13485 552 aaKnown RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 MLECQ14165 292 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 SLC14A2Q15849 920 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 SEPT7Q16181 437 aaKnown RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 ITPRIPL1Q6GPH6 555 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 FAM196AQ6ZSG2 479 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 MYCT1Q8N699 235 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 MSANTD4Q8NCY6 345 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 IPMKQ8NFU5 416 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 KCTD13Q8WZ19 329 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 USP6NLQ92738 828 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 KCNH8Q96L42 1107 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 KIF2CQ99661 725 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 DNAI2Q9GZS0 605 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 INCENPQ9NQS7 918 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 KCNQ5Q9NR82 932 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 PCDHGA4Q9Y5G9 962 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 MADDQ8WXG6 1647 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 PREX1Q8TCU6 1659 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 RRN3P2A6NIE6 340 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 A6NNZ2 444 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 GUCA1CO95843 209 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 MT-ND3P03897 115 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 ASGR2P07307 311 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 TSPY4P0CV99 314 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 TSPY10P0CW01 314 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 PF4V1P10720 104 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 VCAM1P19320 739 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 USP14P54578 494 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 CSE1LP55060 971 aaKnown RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 PLA2G4EQ3MJ16 856 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 ARHGAP29Q52LW3 1261 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 SETMARQ53H47 684 aaPredicted RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 ANKRD39Q53RE8 183 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 METTL24Q5JXM2 366 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 TATDN1Q6P1N9 297 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 BRICD5Q6PL45 260 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 NEK10Q6ZWH5 1172 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 SDCCAG8Q86SQ7 713 aaPredicted RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 MICALL2Q8IY33 904 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 MARVELD3Q96A59 401 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 GCC1Q96CN9 775 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 HS3ST6Q96QI5 342 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 TRIM56Q9BRZ2 755 aaKnown RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 ZNF304Q9HCX3 659 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 LUC7LQ9NQ29 371 aaKnown RBP5.43□□□□□ -1.54
SMG1-207ENST00000563235 SQORQ9Y6N5 450 aa5.43□□□□□ -1.54
SMG1-207ENST00000563235 C2orf72A6NCS6 295 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 B2RBV5 119 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 MASP2O00187 686 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 CCP110O43303 1012 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 BRINP1O60477 761 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 PTCD1O75127 700 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 ATP6V1B1P15313 513 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 HADHAP40939 763 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 RBM6P78332 1123 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 SSRP1Q08945 709 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 MTMR2Q13614 643 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 SF3B3Q15393 1217 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 DOK7Q18PE1 504 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 MINDY4Q4G0A6 757 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 LEO1Q8WVC0 666 aaPredicted RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 RABGGTAQ92696 567 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 ARHGEF2Q92974 986 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 JAKMIP1Q96N16 626 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 C7orf25Q9BPX7 421 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 TCHPQ9BT92 498 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 SLC26A6Q9BXS9 759 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 TEX13BQ9BXU2 312 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 SMOC1Q9H4F8 434 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms