RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PCBP3P57721 371 aaKnown RBP5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 LINC00310P59036 64 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 SOGA3Q5TF21 947 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 NLRX1Q86UT6 975 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 HNRNPLLQ8WVV9 542 aaKnown RBP5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 SMARCC1Q92922 1105 aaPredicted RBP5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 FOXP3Q9BZS1 431 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 PPP1R1BQ9UD71 204 aaPredicted RBP5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 ZMYM5Q9UJ78 669 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 TCFL5Q9UL49 500 aa5.03□□□□□ -1.6
SHCBP1-202ENST00000563219 TEX51A0A1B0GUA7 166 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 SSU72P8A0A1W2PR75 194 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 TMEM82A0PJX8 343 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 NRDCO43847 1150 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 NUAK1O60285 661 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 GALK1P51570 392 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 SNW1Q13573 536 aaKnown RBP5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 RAB33AQ14088 237 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 PPP2R5EQ16537 467 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 BBS9Q3SYG4 887 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 TMEM132EQ6IEE7 984 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 TTLL10Q6ZVT0 673 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 WAPLQ7Z5K2 1190 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 PPFIBP1Q86W92 1011 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 MAP6Q96JE9 813 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 PRDM14Q9GZV8 571 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 CRTAC1Q9NQ79 661 aa5.02□□□□□ -1.61
SHCBP1-202ENST00000563219 OR14I1A6ND48 311 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 FAM86C2PA6NEL3 165 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 SIGLEC6O43699 453 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 USP2O75604 605 aaPredicted RBP5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 EFEMP2O95967 443 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 SLC14A2Q15849 920 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 FXNQ16595 210 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 LILRA6Q6PI73 481 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 SIRT2Q8IXJ6 389 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 CELF2-AS1Q8N7Q2 184 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 KLHL6Q8WZ60 621 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 GCM1Q9NP62 436 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 RAPGEFL1Q9UHV5 662 aa5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 R3HCC1Q9Y3T6 440 aaKnown RBP5.01□□□□□ -1.61
SHCBP1-202ENST00000563219 C9IYK1 514 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 SYPP08247 313 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 SLC7A5Q01650 507 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 SERINC3Q13530 473 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 NCAPHQ15003 741 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 DDR2Q16832 855 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 ANKRD39Q53RE8 183 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 VHLLQ6RSH7 139 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 CEP128Q6ZU80 1094 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 HHIPL1Q96JK4 782 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 DNAJC2Q99543 621 aaKnown RBP5□□□□□ -1.61
SHCBP1-202ENST00000563219 SGPP1Q9BX95 441 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 IRF2BPLQ9H1B7 796 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 PRR13Q9NZ81 148 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 MSRB2Q9Y3D2 182 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 SHROOM4Q9ULL8 1493 aa5□□□□□ -1.61
SHCBP1-202ENST00000563219 HRKO00198 91 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 SHOXO15266 292 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 FKTNO75072 461 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 PNLIPP16233 465 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 RTP1P59025 263 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 GNPTABQ3T906 1256 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 AXDND1Q5T1B0 1012 aaPredicted RBP4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 ADGRF1Q5T601 910 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 LARP1BQ659C4 914 aaKnown RBP4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 ZPBP2Q6X784 338 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 FAM178BQ8IXR5 827 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 MICAL1Q8TDZ2 1067 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 MKL1Q969V6 931 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 ZNF512BQ96KM6 892 aaPredicted RBP4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 TRIM55Q9BYV6 548 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 MKRN2Q9H000 416 aaKnown RBP4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 CHST7Q9NS84 486 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 SIRPGQ9P1W8 387 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 TNFRSF10DQ9UBN6 386 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 CNOT6Q9ULM6 557 aaKnown RBP4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 PCDHB10Q9UN67 800 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 MINPP1Q9UNW1 487 aa4.99□□□□□ -1.61
SHCBP1-202ENST00000563219 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 CBFA2T2O43439 604 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 GJB6O95452 261 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 ZNF143P52747 638 aaPredicted RBP4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 SRSF3P84103 164 aaKnown RBP4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 AUHQ13825 339 aaKnown RBP4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 TDRD10Q5VZ19 366 aaKnown RBP4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 KIAA1211LQ6NV74 962 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 C6orf15Q6UXA7 325 aaPredicted RBP4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 LRP10Q7Z4F1 713 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 CCDC144CPQ8IYA2 1237 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 C7orf61Q8IZ16 206 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 FCRL2Q96LA5 508 aaPredicted RBP4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 HAUS7Q99871 368 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 KCTD3Q9Y597 815 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 PCDHB12Q9Y5F1 795 aa4.98□□□□□ -1.61
SHCBP1-202ENST00000563219 WTIPA6NIX2 430 aaPredicted RBP4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 B2RBV5 119 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms