RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CMTR1Q8N1G2 835 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 REPS2Q8NFH8 660 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 SPATC1LQ9H0A9 340 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 JMJD4Q9H9V9 463 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 CWC22Q9HCG8 908 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 RAVER2Q9HCJ3 691 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 FAM217BQ9NTX9 383 aaPredicted RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 TSKSQ9UJT2 592 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 CNTNAP5Q8WYK1 1306 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 ATP2A1O14983 1001 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 STAT3P40763 770 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 SP3Q02447 781 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 SCRN1Q12765 414 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 SNRNP48Q6IEG0 339 aaKnown RBP21.81■■□□□ 1.08
RAB40C-207ENST00000563109 NBPF11Q86T75 865 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 CCDC82Q8N4S0 544 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 GTF3C6Q969F1 213 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 ZNF214Q9UL59 606 aaPredicted RBP21.81■■□□□ 1.08
RAB40C-207ENST00000563109 CCPG1Q9ULG6 757 aa21.81■■□□□ 1.08
RAB40C-207ENST00000563109 MGAMO43451 1857 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 ZBTB5O15062 677 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 CYTH3O43739 400 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 LARGE1O95461 756 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 SLC25A27O95847 323 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 ICAM1P05362 532 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 AKAP17AQ02040 695 aaKnown RBP21.8■■□□□ 1.08
RAB40C-207ENST00000563109 TRAF1Q13077 416 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 KIF22Q14807 665 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 QRICH1Q2TAL8 776 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 POTEEQ6S8J3 1075 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 PIBF1Q8WXW3 757 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 PIGSQ96S52 555 aa21.8■■□□□ 1.08
RAB40C-207ENST00000563109 RBM27Q9P2N5 1060 aaKnown RBP21.8■■□□□ 1.08
RAB40C-207ENST00000563109 PEX10O60683 326 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 FKTNO75072 461 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 IFNAR1P17181 557 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 SLC35G1Q2M3R5 365 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 RIOX2Q8IUF8 465 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 TRIM22Q8IYM9 498 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 NECAB1Q8N987 351 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 MTMR8Q96EF0 704 aa21.79■■□□□ 1.08
RAB40C-207ENST00000563109 MOV10L1Q9BXT6 1211 aaKnown RBP21.79■■□□□ 1.08
RAB40C-207ENST00000563109 RBBP6Q7Z6E9 1792 aaKnown RBP21.79■■□□□ 1.08
RAB40C-207ENST00000563109 PNMA6FA0A0J9YX94 578 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 CD2BP2O95400 341 aaKnown RBP21.78■■□□□ 1.08
RAB40C-207ENST00000563109 MAPK4P31152 587 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 CTCFP49711 727 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-207ENST00000563109 Q3C1V9 767 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 TKFCQ3LXA3 575 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 NCAPG2Q86XI2 1143 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 FBXO11Q86XK2 927 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 SHCBP1Q8NEM2 672 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 AGBL1Q96MI9 1066 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 AMNQ9BXJ7 453 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 PLXNB2O15031 1838 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 ZNF536O15090 1300 aa21.78■■□□□ 1.08
RAB40C-207ENST00000563109 BAZ2BQ9UIF8 2168 aaKnown RBP21.77■■□□□ 1.08
RAB40C-207ENST00000563109 FOXN1O15353 648 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 ALAS1P13196 640 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 FCGRTP55899 365 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 LACTBP83111 547 aaPredicted RBP21.77■■□□□ 1.08
RAB40C-207ENST00000563109 SSRP1Q08945 709 aaKnown RBP21.77■■□□□ 1.08
RAB40C-207ENST00000563109 FUT2Q10981 343 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 USH1GQ495M9 461 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 SLC26A6Q9BXS9 759 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 RNF26Q9BY78 433 aaPredicted RBP21.77■■□□□ 1.08
RAB40C-207ENST00000563109 MROH8Q9H579 483 aa21.77■■□□□ 1.08
RAB40C-207ENST00000563109 ABCB11O95342 1321 aa21.77■■□□□ 1.07
RAB40C-207ENST00000563109 HSPA8P11142 646 aaKnown RBP21.76■■□□□ 1.07
RAB40C-207ENST00000563109 ERCC3P19447 782 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 ARHGEF6Q15052 776 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 NTRK3Q16288 839 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 CCDC83Q8IWF9 413 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 HSCBQ8IWL3 235 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 ZNF296Q8WUU4 475 aaPredicted RBP21.76■■□□□ 1.07
RAB40C-207ENST00000563109 PHKBQ93100 1093 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 TMX3Q96JJ7 454 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 HOMER2Q9NSB8 354 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 FBXO40Q9UH90 709 aa21.76■■□□□ 1.07
RAB40C-207ENST00000563109 TNPO2O14787 897 aaKnown RBP21.75■■□□□ 1.07
RAB40C-207ENST00000563109 PRPF3O43395 683 aaKnown RBP21.75■■□□□ 1.07
RAB40C-207ENST00000563109 CHST13Q8NET6 341 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 CD99L2Q8TCZ2 262 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 PORCNQ9H237 461 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 EFCC1Q9HA90 598 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 RNF146Q9NTX7 359 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 IVNS1ABPQ9Y6Y0 642 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 V9GY48 417 aaPredicted RBP21.75■■□□□ 1.07
RAB40C-207ENST00000563109 ZSWIM8A7E2V4 1837 aa21.75■■□□□ 1.07
RAB40C-207ENST00000563109 CEP350Q5VT06 3117 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 hCG_1642624A0A1W2PR95 340 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 ECM2O94769 699 aaPredicted RBP21.74■■□□□ 1.07
RAB40C-207ENST00000563109 FMNL1O95466 1100 aaPredicted RBP21.74■■□□□ 1.07
RAB40C-207ENST00000563109 HEATR3Q7Z4Q2 680 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 SNX21Q969T3 373 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 TRERF1Q96PN7 1200 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 ACAD9Q9H845 621 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms