RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ESYT2A0FGR8 921 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 hCG_1984214I3L0E3 225 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 WNT10BO00744 389 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 PTGER2P43116 358 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 ELOA2Q8IYF1 753 aaPredicted RBP10.71□□□□□ -0.69
LINC00838-201ENST00000562956 ZNF713Q8N859 430 aaPredicted RBP10.71□□□□□ -0.69
LINC00838-201ENST00000562956 ZBED3Q96IU2 234 aaPredicted RBP10.71□□□□□ -0.69
LINC00838-201ENST00000562956 TMEM260Q9NX78 707 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 BIN2Q9UBW5 565 aaPredicted RBP10.71□□□□□ -0.69
LINC00838-201ENST00000562956 PCDHA5Q9Y5H7 936 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 CD2APQ9Y5K6 639 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 PRR29P0C7W0 189 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 POSTNQ15063 836 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 JAKMIP3Q5VZ66 844 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 DCAF4Q8WV16 495 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 DHX58Q96C10 678 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 MTMR8Q96EF0 704 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.7
LINC00838-201ENST00000562956 TMEM60Q9H2L4 133 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 MYOZ2Q9NPC6 264 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 CCDC39Q9UFE4 941 aa10.71□□□□□ -0.7
LINC00838-201ENST00000562956 SCAF8Q9UPN6 1271 aaKnown RBP10.71□□□□□ -0.7
LINC00838-201ENST00000562956 A0A1W2PRG0 241 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 F5H6K3 240 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 GOLGA6L19H0YKK7 550 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 ZBTB5O15062 677 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 PTMAP06454 111 aaKnown RBP10.7□□□□□ -0.7
LINC00838-201ENST00000562956 RASSF7Q02833 373 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 KLRC3Q07444 240 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 NONOQ15233 471 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00838-201ENST00000562956 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
LINC00838-201ENST00000562956 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 REXO1Q8N1G1 1221 aaKnown RBP10.7□□□□□ -0.7
LINC00838-201ENST00000562956 NUP88Q99567 741 aaPredicted RBP10.7□□□□□ -0.7
LINC00838-201ENST00000562956 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.7□□□□□ -0.7
LINC00838-201ENST00000562956 BECN2A8MW95 431 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 EGFRP00533 1210 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 ADCY7P51828 1080 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 PRELPP51888 382 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 GMCL1P1Q8NEA9 526 aa10.7□□□□□ -0.7
LINC00838-201ENST00000562956 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 NDUFB10O96000 172 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 UQCRHP07919 91 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 BMP6P22004 513 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 LETM2Q2VYF4 491 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 MIGA2Q7L4E1 593 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 NLGN2Q8NFZ4 835 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 TBCKQ8TEA7 893 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 BPIFA3Q9BQP9 254 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
LINC00838-201ENST00000562956 MYO1BO43795 1136 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 CCNT1O60563 726 aaKnown RBP10.69□□□□□ -0.7
LINC00838-201ENST00000562956 OFD1O75665 1012 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 CDC25AP30304 524 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 TNIP1Q15025 636 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 FAM83AQ86UY5 434 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 PLA2G4DQ86XP0 818 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 TRIM5Q9C035 493 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 PGAP2Q9UHJ9 254 aa10.69□□□□□ -0.7
LINC00838-201ENST00000562956 BRCA1P38398 1863 aaKnown RBP10.69□□□□□ -0.7
LINC00838-201ENST00000562956 SLFN14P0C7P3 912 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 ECE1P42892 770 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
LINC00838-201ENST00000562956 ZNF75DP51815 510 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 QRICH1Q2TAL8 776 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 NT5DC1Q5TFE4 455 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 NEK8Q86SG6 692 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 SPC24Q8NBT2 197 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC00838-201ENST00000562956 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 RIC8AQ9NPQ8 531 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.68□□□□□ -0.7
LINC00838-201ENST00000562956 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 LONP1P36776 959 aaKnown RBP10.68□□□□□ -0.7
LINC00838-201ENST00000562956 AFMP43652 599 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 SNAP25P60880 206 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 E2F4Q16254 413 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 UBE2SQ16763 222 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 KANK3Q6NY19 840 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 PPP1R18Q6NYC8 613 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 SPICE1Q8N0Z3 855 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 ACER1Q8TDN7 264 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 PAGE5Q96GU1 130 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 MAN1B1Q9UKM7 699 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 MYH4Q9Y623 1939 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 EDIL3O43854 480 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 CASP1P29466 404 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 ZNF280AP59817 542 aaPredicted RBP10.68□□□□□ -0.7
LINC00838-201ENST00000562956 CDC37Q16543 378 aaPredicted RBP10.68□□□□□ -0.7
LINC00838-201ENST00000562956 KIAA1755Q5JYT7 1200 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 DTHD1Q6ZMT9 781 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 SH3RF1Q7Z6J0 888 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
LINC00838-201ENST00000562956 PP2D1A8MPX8 630 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 TMEM232C9JQI7 657 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 TBC1D12O60347 775 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms