RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ALPK1Q96QP1 1244 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 TPK1Q9H3S4 243 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 PFDN2Q9UHV9 154 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 IVNS1ABPQ9Y6Y0 642 aa10.38□□□□□ -0.75
CDH1-205ENST00000562836 TMCC2O75069 709 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 USH1GQ495M9 461 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 NAALADL2Q58DX5 795 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 ESCO1Q5FWF5 840 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 EGFLAMQ63HQ2 1017 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 SRGAP1Q7Z6B7 1085 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 SYTL4Q96C24 671 aaPredicted RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 ERP44Q9BS26 406 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 MXD3Q9BW11 206 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 OSBPL1AQ9BXW6 950 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 PAG1Q9NWQ8 432 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 CCPG1Q9ULG6 757 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 CHMP2BQ9UQN3 213 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 C15orf41Q9Y2V0 281 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 EIF3AQ14152 1382 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 ACTN4O43707 911 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 MGRN1O60291 552 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 DIAPH2O60879 1101 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 RALGDSQ12967 914 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 LDLRAD1Q5T700 205 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 KCTD16Q68DU8 428 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 RAVER1Q8IY67 606 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 ABTB1Q969K4 478 aaPredicted RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 GFM2Q969S9 779 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 CLMNQ96JQ2 1002 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 CEP44Q9C0F1 390 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 CCSER2Q9H7U1 834 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 TCF7L2Q9NQB0 619 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 MKL2Q9ULH7 1088 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 EXOC7Q9UPT5 735 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 LZTS1Q9Y250 596 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 TSC22D4Q9Y3Q8 395 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 AATKQ6ZMQ8 1374 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 LOC105371267A0A1B0GV96 52 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 hCG_1984214I3L0E3 225 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 MEFVO15553 781 aaPredicted RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 ASAP2O43150 1006 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 HNRNPRO43390 633 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 NMT2O60551 498 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 ATP5DP30049 168 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 HPDP32754 393 aaPredicted RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 HSPA4P34932 840 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 GEMIN4P57678 1058 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 EVCP57679 992 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 GNL2Q13823 731 aaKnown RBP10.37□□□□□ -0.75
CDH1-205ENST00000562836 PLEKHG6Q3KR16 790 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 SYCP2LQ5T4T6 812 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 LURAP1LQ8IV03 231 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 CCDC13Q8IYE1 715 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 BCAS4Q8TDM0 211 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 WDR60Q8WVS4 1066 aa10.37□□□□□ -0.75
CDH1-205ENST00000562836 M0QX08 132 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ARHGAP33O14559 1287 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ABLIM1O14639 778 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 KLHL41O60662 606 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ALAS2P22557 587 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 STAT6P42226 847 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ARHGAP25P42331 645 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 SP140Q13342 867 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 HSP90AA5PQ58FG0 334 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 TXNDC2Q86VQ3 553 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDH1-205ENST00000562836 PPFIBP2Q8ND30 876 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 AFAP1L1Q8TED9 768 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 STON2Q8WXE9 905 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ZNF496Q96IT1 587 aaPredicted RBP10.36□□□□□ -0.75
CDH1-205ENST00000562836 SLC4A4Q9Y6R1 1079 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ABCC11Q96J66 1382 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 CCDC169A6NNP5 214 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 ZW10O43264 779 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 DDHD2O94830 711 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 CYP2E1P05181 493 aaPredicted RBP10.36□□□□□ -0.75
CDH1-205ENST00000562836 AP2B1P63010 937 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 NOP9Q86U38 636 aaKnown RBP10.36□□□□□ -0.75
CDH1-205ENST00000562836 ALG1Q9BT22 464 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 EBF2Q9HAK2 575 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 TRIM17Q9Y577 477 aa10.36□□□□□ -0.75
CDH1-205ENST00000562836 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 EPRSP07814 1512 aaKnown RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 CLASP2O75122 1294 aaKnown RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 TADA3O75528 432 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 APOEP02649 317 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 GYS1P13807 737 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 MXI1P50539 228 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 E2F2Q14209 437 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 NFE2L2Q16236 605 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 CCDC153Q494R4 210 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms