RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ANKRD36BQ8N2N9 1353 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 A0A0G2JLW4 131 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 FAM221AA4D161 298 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 FANCGO15287 622 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 PRELPP51888 382 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 RING1Q06587 406 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 LINC00116Q8NCU8 138 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 RNF214Q8ND24 703 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 EZH1Q92800 747 aaPredicted RBP7.72□□□□□ -1.17
UBR1-203ENST00000562173 ELMO3Q96BJ8 720 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 SPATA32Q96LK8 384 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 FANCD2OSQ96PS1 177 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 SIN3AQ96ST3 1273 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 SLC12A5Q9H2X9 1139 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 ADAMTS1Q9UHI8 967 aa7.72□□□□□ -1.17
UBR1-203ENST00000562173 GRIN3BO60391 1043 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 GREM1O60565 184 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 DRD2P14416 443 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 USP11P51784 963 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 PTPN11Q06124 597 aaPredicted RBP7.71□□□□□ -1.18
UBR1-203ENST00000562173 ITPK1Q13572 414 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 LRFN4Q6PJG9 635 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 MPRIPQ6WCQ1 1025 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 CYFIP1Q7L576 1253 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 DYMQ7RTS9 669 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 GOLM1Q8NBJ4 401 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 KCT2Q8NC54 265 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 PLPPR2Q96GM1 343 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 ACSS3Q9H6R3 686 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 DISC1Q9NRI5 854 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 TIAM2Q8IVF5 1701 aa7.71□□□□□ -1.18
UBR1-203ENST00000562173 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.18
UBR1-203ENST00000562173 COL5A3P25940 1745 aaPredicted RBP7.7□□□□□ -1.18
UBR1-203ENST00000562173 MINDY4BA8MYZ0 360 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 GSC2O15499 205 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 F13A1P00488 732 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 BMP3P12645 472 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 ASPAP45381 313 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 MAP7Q14244 749 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 RRS1Q15050 365 aaKnown RBP7.7□□□□□ -1.18
UBR1-203ENST00000562173 CWF19L2Q2TBE0 894 aaKnown RBP7.7□□□□□ -1.18
UBR1-203ENST00000562173 ZNF394Q53GI3 561 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 ZBTB37Q5TC79 503 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 NBPF6Q5VWK0 638 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 FBXL19Q6PCT2 694 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 BNC2Q6ZN30 1099 aaPredicted RBP7.7□□□□□ -1.18
UBR1-203ENST00000562173 PRR23CQ6ZRP0 262 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 CLEC10AQ8IUN9 316 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 ZNF296Q8WUU4 475 aaPredicted RBP7.7□□□□□ -1.18
UBR1-203ENST00000562173 NBPF4Q96M43 638 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 SPON2Q9BUD6 331 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 CCSER2Q9H7U1 834 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 FAM105AQ9NUU6 356 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 RAXQ9Y2V3 346 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 PCDHGB7Q9Y5F8 929 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 MAP3K19Q56UN5 1328 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 A0A1W2PP64 1363 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 PALLDQ8WX93 1383 aa7.7□□□□□ -1.18
UBR1-203ENST00000562173 F6X3S4 739 aa7.69□□□□□ -1.18
UBR1-203ENST00000562173 MAP4P27816 1152 aaKnown RBP7.69□□□□□ -1.18
UBR1-203ENST00000562173 ERCC5P28715 1186 aaPredicted RBP7.69□□□□□ -1.18
UBR1-203ENST00000562173 FAM160A1Q05DH4 1040 aa7.69□□□□□ -1.18
UBR1-203ENST00000562173 RAD51AP2Q09MP3 1159 aa7.69□□□□□ -1.18
UBR1-203ENST00000562173 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.69□□□□□ -1.18
UBR1-203ENST00000562173 NPM2Q86SE8 214 aaKnown RBP7.69□□□□□ -1.18
UBR1-203ENST00000562173 SLC51AQ86UW1 340 aa7.69□□□□□ -1.18
UBR1-203ENST00000562173 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
UBR1-203ENST00000562173 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.69□□□□□ -1.18
UBR1-203ENST00000562173 GFRA2O00451 464 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 CYP27B1O15528 508 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 HSPA1AP0DMV8 641 aaKnown RBP7.68□□□□□ -1.18
UBR1-203ENST00000562173 HSPA1BP0DMV9 641 aaKnown RBP7.68□□□□□ -1.18
UBR1-203ENST00000562173 DPEP1P16444 411 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 HOXC9P31274 260 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 NTF4P34130 210 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 GJA8P48165 433 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 PDE4BQ07343 736 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 COL9A2Q14055 689 aaPredicted RBP7.68□□□□□ -1.18
UBR1-203ENST00000562173 TTLL4Q14679 1199 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 SGO2Q562F6 1265 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 BEND4Q6ZU67 534 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 ZCRB1Q8TBF4 217 aaKnown RBP7.68□□□□□ -1.18
UBR1-203ENST00000562173 FAM83CQ9BQN1 747 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 PICK1Q9NRD5 415 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 ADAM30Q9UKF2 790 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 CD2APQ9Y5K6 639 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 KIF20BQ96Q89 1820 aa7.68□□□□□ -1.18
UBR1-203ENST00000562173 TNRC6CQ9HCJ0 1690 aaKnown RBP7.67□□□□□ -1.18
UBR1-203ENST00000562173 ADAMTS7Q9UKP4 1686 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 VIRMAQ69YN4 1812 aaKnown RBP7.67□□□□□ -1.18
UBR1-203ENST00000562173 DCDC2CA8MYV0 355 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 NEFMP07197 916 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 RAB6AP20340 208 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 KCNA3P22001 575 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 CAP2P40123 477 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 RACK1P63244 317 aaKnown RBP7.67□□□□□ -1.18
UBR1-203ENST00000562173 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 INPP5AQ14642 412 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms